RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
GPNMB-203ENST00000409458 ZNF764Q96H86 408 aaPredicted RBP13.34□□□□□ -0.27
GPNMB-203ENST00000409458 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 TRIM4Q9C037 500 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 NLGN3Q9NZ94 848 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 ZNF282Q9UDV7 671 aaPredicted RBP13.34□□□□□ -0.27
GPNMB-203ENST00000409458 FBXW2Q9UKT8 454 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 ANGPTL2Q9UKU9 493 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 VPS4AQ9UN37 437 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
GPNMB-203ENST00000409458 A0A1W2PR48 441 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 A0A1W2PRB8 838 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 PATE3B3GLJ2 98 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 CLIC1O00299 241 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 BAG2O95816 211 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 AIFM1O95831 613 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 SP9P0CG40 484 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 GLB1P16278 677 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 IL1RNP18510 177 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 GGT1P19440 569 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 CNR2P34972 360 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 VSX2P58304 361 aaPredicted RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 RHDQ02161 417 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 SUZ12Q15022 739 aaKnown RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 DEFB134Q4QY38 66 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 TMEM214Q6NUQ4 689 aaKnown RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 PNPT1Q8TCS8 783 aaKnown RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 SAP25Q8TEE9 199 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 ZFP90Q8TF47 636 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 NRG4Q8WWG1 115 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 KLHL6Q8WZ60 621 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 NCSTNQ92542 709 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 MAPKAP1Q9BPZ7 522 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 FAIM2Q9BWQ8 316 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 CAPN10Q9HC96 672 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 STARD5Q9NSY2 213 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 LYARQ9NX58 379 aaKnown RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 MAGEL2Q9UJ55 1249 aa13.33□□□□□ -0.28
GPNMB-203ENST00000409458 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
GPNMB-203ENST00000409458 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 IGHV1OR21-1A0A087WYE8 117 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 TLCD2A6NGC4 264 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 URADA6NGE7 173 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 GLOD5A6NK44 160 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 AQP12BA6NM10 295 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ZSCAN9O15535 394 aaPredicted RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 C9P02748 559 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 DRD2P14416 443 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 PTDSS1P48651 473 aaKnown RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ABHD18Q0P651 414 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 NR1D2Q14995 579 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 C18orf63Q68DL7 685 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ZFP1Q6P2D0 407 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ABHD13Q7L211 337 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 PRSS41Q7RTY9 318 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 PROSER1Q86XN7 944 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 AQP12AQ8IXF9 295 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 DNAJC22Q8N4W6 341 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF655Q8N720 491 aaPredicted RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 SLCO4A1Q96BD0 722 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 AHCYL2Q96HN2 611 aaKnown RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ROGDIQ9GZN7 287 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 RAB33BQ9H082 229 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 RPF2Q9H7B2 306 aaKnown RBP13.32□□□□□ -0.28
GPNMB-203ENST00000409458 STOML1Q9UBI4 398 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 KMT2EQ8IZD2 1858 aa13.32□□□□□ -0.28
GPNMB-203ENST00000409458 IGHV5-51A0A0C4DH38 117 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TCRBV5S2A0A599 114 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ELOVL7A1L3X0 281 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CASC3O15234 703 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PROM1O43490 865 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 DNAJB6O75190 326 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 DDX5P17844 614 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ALOX12P18054 663 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GPX2P18283 190 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CSF2RBP32927 897 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 HOXD12P35452 270 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 SOAT1P35610 550 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 MLLT3P42568 568 aaPredicted RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 FRKP42685 505 aaPredicted RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PCBP4P57723 403 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CFHR1Q03591 330 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ANGPT1Q15389 498 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 LPAL2Q16609 132 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GLYATQ6IB77 296 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZCCHC8Q6NZY4 707 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 LRRC74BQ6ZQY2 392 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 MCATQ8IVS2 390 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 MICU2Q8IYU8 434 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 Q8N9G6 341 aaPredicted RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZBTB44Q8NCP5 570 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms