RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SLC6A14Q9UN76 642 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 SSR3Q9UNL2 185 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 ZFP37Q9Y6Q3 630 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-205ENST00000409455 SEC14L5O43304 696 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 PIPP12273 146 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-205ENST00000409455 RPS3P23396 243 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIMS2-205ENST00000409455 CRYBB2P43320 205 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 HOXC5Q00444 222 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 MXD1Q05195 221 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 DOC2BQ14184 412 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 TXNDC8Q6A555 127 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 TSEN54Q7Z6J9 526 aaKnown RBP14.8□□□□□ -0.04
LIMS2-205ENST00000409455 SERPINA9Q86WD7 417 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 BBS7Q8IWZ6 715 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 PLD4Q96BZ4 506 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 MAPKAP1Q9BPZ7 522 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 BOCQ9BWV1 1114 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 IL21Q9HBE4 155 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 TMPRSS11EQ9UL52 423 aa14.8□□□□□ -0.04
LIMS2-205ENST00000409455 A0A1W2PQL4 384 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 HYKKA2RU49 373 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SHOXO15266 292 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 PRMT3O60678 531 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 FHP07954 510 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 TNFRSF1BP20333 461 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 UQCRC1P31930 480 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CSTF2P33240 577 aaKnown RBP eCLIP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 PCGF2P35227 344 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 WNT3P56703 355 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 BOP1Q14137 746 aaKnown RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SPHARQ15513 63 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 GGTA1PQ4G0N0 100 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 IFI44LQ53G44 452 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 DDI2Q5TDH0 399 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 LCN1P1Q5VSP4 162 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 LILRA6Q6PI73 481 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 FAM151BQ6UXP7 276 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 NLRP8Q86W28 1048 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CLDN19Q8N6F1 224 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 C11orf65Q8NCR3 313 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 OR8J2Q8NGG1 315 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CDC26Q8NHZ8 85 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 GTPBP3Q969Y2 492 aaKnown RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SLC25A46Q96AG3 418 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 VPS35Q96QK1 796 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 TCF25Q9BQ70 676 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 GPR63Q9BZJ6 419 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 MAFFQ9ULX9 164 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SCN2BO60939 215 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 PRAMEF1O95521 474 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CYP2A6P11509 494 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 HLA-EP13747 358 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 ALAS2P22557 587 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 PPIBP23284 216 aaKnown RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CHMP24386 653 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SGSHP51688 502 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SNRPD2P62316 118 aaKnown RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 ZXDBP98169 803 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 AMIGO1Q86WK6 493 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 SLC34A3Q8N130 599 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 ARL14EPQ8N8R7 260 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 FAM129BQ96TA1 746 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 TRAF4Q9BUZ4 470 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 GTPBP2Q9BX10 602 aaKnown RBP14.79□□□□□ -0.04
LIMS2-205ENST00000409455 NDUFB11Q9NX14 153 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 ARL15Q9NXU5 204 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 IL17CQ9P0M4 197 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 CHD7Q9P2D1 2997 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 HSPB11Q9Y547 144 aa14.79□□□□□ -0.04
LIMS2-205ENST00000409455 HIDE1A8MVS5 230 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 CDRT1O95170 752 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 OPN1SWP03999 348 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 PSKH1P11801 424 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 CKMT1AP12532 417 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 EPORP19235 508 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 ITGB7P26010 798 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 GPC1P35052 558 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 OR1E2P47887 323 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 HNRNPA0Q13151 305 aaKnown RBP14.78□□□□□ -0.04
LIMS2-205ENST00000409455 ADGRF1Q5T601 910 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-205ENST00000409455 GAREM2Q75VX8 874 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 OR4M1Q8NGD0 313 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 CREB3L4Q8TEY5 395 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 KIAA1143Q96AT1 154 aaPredicted RBP14.78□□□□□ -0.04
LIMS2-205ENST00000409455 OMA1Q96E52 524 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 TRMT61AQ96FX7 289 aaKnown RBP14.78□□□□□ -0.04
LIMS2-205ENST00000409455 MND1Q9BWT6 205 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 CHST8Q9H2A9 424 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 MAT2BQ9NZL9 334 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 LSM2Q9Y333 95 aaKnown RBP14.78□□□□□ -0.04
LIMS2-205ENST00000409455 ALG5Q9Y673 324 aa14.78□□□□□ -0.04
LIMS2-205ENST00000409455 TMEM229AB2RXF0 380 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 AGRPO00253 132 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 MEN1O00255 615 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 AKR7A2O43488 359 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 PROM1O43490 865 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 KDELR3O43731 214 aa14.77□□□□□ -0.04
LIMS2-205ENST00000409455 CSO75390 466 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms