RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CYR61O00622 381 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 ULK1O75385 1050 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 PDYNP01213 254 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 BSGP35613 385 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 ETV4P43268 484 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 EEF1A2Q05639 463 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 LANCL3Q6ZV70 420 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 ZCCHC7Q8N3Z6 543 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 GALNT16Q8N428 558 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 C9orf43Q8TAL5 461 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 CNDP1Q96KN2 507 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 PTCHD1Q96NR3 888 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 SEMA4CQ9C0C4 833 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 ZNF700Q9H0M5 742 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 SLC25A18Q9H1K4 315 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 DDX31Q9H8H2 851 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 PRDM9Q9NQV7 894 aa18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 MRPS33Q9Y291 106 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-207ENST00000409417 NSG1A0A0A6YYJ2 146 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 GOLGA6L10A6NI86 522 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 CLDN4O14493 209 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 HMOX2P30519 316 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 ZNF33BQ06732 778 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 SLAMF1Q13291 335 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 TCHHL1Q5QJ38 904 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 TCTN3Q6NUS6 607 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 CPEB2Q7Z5Q1 589 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 ANKRD37Q7Z713 158 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 SREK1Q8WXA9 508 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 TSLPQ969D9 159 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 MAPKAP1Q9BPZ7 522 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 SLC25A23Q9BV35 468 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 MECRQ9BV79 373 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 ZNF160Q9HCG1 818 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 MLXIPLQ9NP71 852 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 RIC8BQ9NVN3 520 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 ARGLU1Q9NWB6 273 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 NMRK1Q9NWW6 199 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 AHSPQ9NZD4 102 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 G3BP2Q9UN86 482 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 MMACHCQ9Y4U1 282 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 SPACA6W5XKT8 324 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 COL6A6A6NMZ7 2263 aa18.66■□□□□ 0.58
PDLIM2-207ENST00000409417 IGKV3D-11A0A0A0MRZ8 115 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 A6NL46 340 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 TM9SF1O15321 606 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 HSD3B1P14060 373 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 H2AFXP16104 143 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 HSD3B2P26439 372 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 HSD17B7P56937 341 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 BTG2P78543 158 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 PCOLCEQ15113 449 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 FAM219BQ5XKK7 198 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 ZNF595Q8IYB9 648 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 GBP7Q8N8V2 638 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 FAM47BQ8NA70 645 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 FDCSPQ8NFU4 85 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 KCNA7Q96RP8 456 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 MS4A12Q9NXJ0 267 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 SLC12A4Q9UP95 1085 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 TIMM22Q9Y584 194 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 A0A0A6YYD5 115 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 EEDO75530 441 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 BPGMP07738 259 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 MAOAP21397 527 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 Q0VFX4 171 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 CSTF3Q12996 717 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 MYBPC3Q14896 1274 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 NUDT13Q86X67 352 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 SCUBE1Q8IWY4 988 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 IMMP1LQ96LU5 166 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 CSF3RQ99062 836 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 HBEGFQ99075 208 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 TUBB6Q9BUF5 446 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 MRPL1Q9BYD6 325 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 GPR83Q9NYM4 423 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 ADAM29Q9UKF5 820 aa18.65■□□□□ 0.58
PDLIM2-207ENST00000409417 IGHV3-20A0A0C4DH32 117 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 BLACEA4D250 179 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 NPHS1O60500 1241 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 KLHL41O60662 606 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 ZWINTO95229 277 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 ICAM2P13598 275 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 ITGA3P26006 1051 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 SERPINB4P48594 390 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 PGDP52209 483 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 HNRNPFP52597 415 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 FOXA1P55317 472 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 MPP2Q14168 576 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 LACTB2Q53H82 288 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 SFT2D3Q587I9 215 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 MRM1Q6IN84 353 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 PAGE2Q7Z2X7 111 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 GPR180Q86V85 440 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 PARP9Q8IXQ6 854 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 KBTBD2Q8IY47 623 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 METTL4Q8N3J2 472 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 TMEM52Q8NDY8 209 aa18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 WDR77Q9BQA1 342 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-207ENST00000409417 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms