RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 FOXE1O00358 373 aaPredicted RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 CLDN4O14493 209 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 CTNSO60931 367 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 WDPCPO95876 746 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 RPS17P08708 135 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 RHOXF2BP0C7M4 288 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 MAOAP21397 527 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 HIST1H1TP22492 207 aaPredicted RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ATP5A1P25705 553 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 CERS1P27544 350 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 PLA2G16P53816 162 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 CUL3Q13618 768 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 UBAP2LQ14157 1087 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 SLC29A2Q14542 456 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 MEP1AQ16819 746 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ACER2Q5QJU3 275 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ABHD17BQ5VST6 288 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 KHDRBS2Q5VWX1 349 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 GOLGA7Q7Z5G4 137 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 FAM26EQ8N5C1 309 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 AMER2Q8N7J2 671 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ACOT4Q8N9L9 421 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 LRRN4CLQ8ND94 238 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 TMEM52Q8NDY8 209 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 HUS1BQ8NHY5 278 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 WDR20Q8TBZ3 569 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ACMSDQ8TDX5 336 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 REPS1Q96D71 796 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 SLX1AQ9BQ83 275 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 RHOXF2Q9BQY4 288 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF717Q9BY31 904 aaPredicted RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 IPPKQ9H8X2 491 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 ZBTB26Q9HCK0 441 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 DMRT3Q9NQL9 472 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 STMN3Q9NZ72 180 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 XPR1Q9UBH6 696 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
SUMO1-206ENST00000409368 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
SUMO1-206ENST00000409368 MAST4O15021 2626 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 OR7A17O14581 309 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 MYBL2P10244 700 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 GNLYP22749 145 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 PTX3P26022 381 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 TRHRP34981 398 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 HNRNPFP52597 415 aaKnown RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 ARG2P78540 354 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 TRAF3Q13114 568 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 TDRPQ86YL5 185 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 SLC5A8Q8N695 610 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 PTGR2Q8N8N7 351 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 ST6GALNAC3Q8NDV1 305 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 MDS2Q8NDY4 140 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 CATSPER1Q8NEC5 780 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 FAR1Q8WVX9 515 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 CCT6BQ92526 530 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 ACTR8Q9H981 624 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 PPCSQ9HAB8 311 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 AGPAT4Q9NRZ5 378 aa12.1□□□□□ -0.47
SUMO1-206ENST00000409368 CPSF2Q9P2I0 782 aaKnown RBP12.1□□□□□ -0.47
SUMO1-206ENST00000409368 DIDO1Q9BTC0 2240 aaKnown RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 A0A0G2JN53 185 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 PRAMEF2O60811 474 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 SMIM24O75264 130 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 SEMA3DO95025 777 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 CLDN9O95484 217 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 GSTA1P08263 222 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF33BQ06732 778 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 BIKQ13323 160 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 OR4C11Q6IEV9 310 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 SH2D5Q6ZV89 423 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 B3GNT7Q8NFL0 401 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 OR1N1Q8NGS0 311 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 UHMK1Q8TAS1 419 aaKnown RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 GRHL3Q8TE85 626 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 ZNF483Q8TF39 744 aaPredicted RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 RGMAQ96B86 450 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 CSF3RQ99062 836 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 DDX31Q9H8H2 851 aaKnown RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 COPS7BQ9H9Q2 264 aaPredicted RBP12.09□□□□□ -0.47
SUMO1-206ENST00000409368 KCNK13Q9HB14 408 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 ADAP2Q9NPF8 381 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 PRTFDC1Q9NRG1 225 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 MS4A12Q9NXJ0 267 aa12.09□□□□□ -0.47
SUMO1-206ENST00000409368 PLA2G3Q9NZ20 509 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms