RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SPIN1Q9Y657 262 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 POM121CA8CG34 1229 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 H3BNC9 293 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 SAP18O00422 153 aaKnown RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 PLK4O00444 970 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 IGLV3-27P01718 113 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 GPC1P35052 558 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 AFMIDQ63HM1 303 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 GET4Q7L5D6 327 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 GPR149Q86SP6 731 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 OR4K1Q8NGD4 311 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 IPCEF1Q8WWN9 437 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 NYNRINQ9P2P1 1898 aaKnown RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 HMX3A6NHT5 357 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 ANKRD66B4E2M5 251 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 LEFTY2O00292 366 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 GRM6O15303 877 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 F11P03951 625 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 RORCP51449 518 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 NFKB2Q00653 900 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 PRKCDQ05655 676 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 RING1Q06587 406 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 RAB33AQ14088 237 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 TIMM50Q3ZCQ8 353 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 CRTC2Q53ET0 693 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 USP30Q70CQ3 517 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 GALNT11Q8NCW6 608 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 SMG7Q92540 1137 aaKnown RBP12.43□□□□□ -0.42
PTPRN-202ENST00000409251 IL21Q9HBE4 155 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 TM9SF3Q9HD45 589 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 ATP6V1HQ9UI12 483 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 SSR3Q9UNL2 185 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 ALG5Q9Y673 324 aa12.43□□□□□ -0.42
PTPRN-202ENST00000409251 TSC2P49815 1807 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 DNAJB5O75953 348 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 HRGP04196 525 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 IL6P05231 212 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ITGA2P17301 1181 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 NNMTP40261 264 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 MAPKAPK2P49137 400 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 CSRP3P50461 194 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 GPR50Q13585 617 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 EXOC3L2Q2M3D2 409 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 XKR7Q5GH72 579 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 SNX20Q7Z614 316 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 BRSK1Q8TDC3 778 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ADAMTS19Q8TE59 1207 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 APH1BQ8WW43 257 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 HCN4Q9Y3Q4 1203 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 CDK1P06493 297 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 XPAP23025 273 aaPredicted RBP12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ZNF81P51508 661 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 CDC42P60953 191 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 TUBA3EQ6PEY2 450 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ZSWIM9Q86XI8 627 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ZZZ3Q8IYH5 903 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 DNAJC22Q8N4W6 341 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 IQCF1Q8N6M8 205 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 RHEBL1Q8TAI7 183 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 RASSF5Q8WWW0 418 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 AKAP1Q92667 903 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPRN-202ENST00000409251 PSKH2Q96QS6 385 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 COL4A6Q14031 1691 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 LOC105369274A0A096LPK9 316 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 OR7A17O14581 309 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 AREL1O15033 823 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 KDELR3O43731 214 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 CCNDBP1O95273 360 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 GPR68Q15743 365 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 ATP13A5Q4VNC0 1218 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 KDM4DQ6B0I6 523 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 BHLHB9Q6PI77 547 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 KRT73Q86Y46 540 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 OR4N4Q8N0Y3 316 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 Q8N402 240 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 LMNTD1Q8N9Z9 388 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 SIMC1Q8NDZ2 872 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 NLGN4YQ8NFZ3 816 aaPredicted RBP12.42□□□□□ -0.42
PTPRN-202ENST00000409251 MED8Q96G25 268 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 TTLL2Q9BWV7 592 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 SORBS1Q9BX66 1292 aaKnown RBP12.42□□□□□ -0.42
PTPRN-202ENST00000409251 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 RPS6KA6Q9UK32 745 aa12.42□□□□□ -0.42
PTPRN-202ENST00000409251 NLRC5Q86WI3 1866 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 PRR23AA6NEV1 266 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 MAGEB17A8MXT2 336 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CAPN5O15484 640 aaPredicted RBP12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CD160O95971 181 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ESR1P03372 595 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 ADH1AP07327 375 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 GSTM1P09488 218 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 SDC2P34741 201 aa12.41□□□□□ -0.42
PTPRN-202ENST00000409251 CNR2P34972 360 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms