RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DGKZQ13574 1117 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GK3PQ14409 553 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 VITQ6UXI7 678 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 VWA5B2Q8N398 1253 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 MTMR14Q8NCE2 650 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 PNPLA2Q96AD5 504 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 DPEP2Q9H4A9 486 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ACTL8Q9H568 366 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GSKIPQ9P0R6 139 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 DLGAP4Q9Y2H0 992 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 TTC34A8MYJ7 566 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 GDF5P43026 501 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 HNRNPFP52597 415 aaKnown RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 ACTA2P62736 377 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ACTG2P63267 376 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 DECR1Q16698 335 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 FAM198BQ6UWH4 519 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 ZNF550Q7Z398 422 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 HERVK_113Q902F9 699 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 SLC38A3Q99624 504 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 DPCDQ9BVM2 203 aaPredicted RBP12.5□□□□□ -0.41
RNF43-201ENST00000407977 TMEM185BQ9H7F4 350 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
RNF43-201ENST00000407977 SLC22A31A6NKX4 558 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 NDUFS4O43181 175 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 TMEM135Q86UB9 458 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 OR10Q1Q8NGQ4 319 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 TMEM41AQ96HV5 264 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CACNG6Q9BXT2 260 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 BEX2Q9BXY8 128 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 BEX1Q9HBH7 125 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ACOT13Q9NPJ3 140 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 TAC3Q9UHF0 121 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 PCDHB11Q9Y5F2 797 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SLIT2O94813 1529 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CAPN14A8MX76 684 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SOCS2O14508 198 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CCL16O15467 120 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ALPIP09923 528 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SLC6A9P48067 706 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SOX9P48436 509 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 RCAN2Q14206 197 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CDK10Q15131 360 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 DCUN1D3Q8IWE4 304 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ABCG4Q9H172 646 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
RNF43-201ENST00000407977 RGS9O75916 674 aaPredicted RBP12.49□□□□□ -0.41
RNF43-201ENST00000407977 HCKP08631 526 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 S1PR1P21453 382 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 FRKP42685 505 aaPredicted RBP12.49□□□□□ -0.41
RNF43-201ENST00000407977 HK3P52790 923 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 PPIGQ13427 754 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■□□□ 11.6
RNF43-201ENST00000407977 GNMTQ14749 295 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SPIN3Q5JUX0 258 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 C1orf74Q96LT6 269 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 AP1S3Q96PC3 154 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 WASF3Q9UPY6 502 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 B3GNT3Q9Y2A9 372 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 VILLO15195 856 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
RNF43-201ENST00000407977 AHSA1O95433 338 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 GGT1P19440 569 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 OR9A1PQ8NGU1 263 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 GATA6Q92908 595 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 SECISBP2Q96T21 854 aaKnown RBP12.49□□□□□ -0.41
RNF43-201ENST00000407977 NELL2Q99435 816 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
RNF43-201ENST00000407977 A0A0G2JN53 185 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 H7C417 338 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 M0R129 80 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 TLL1O43897 1013 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PPM1BO75688 479 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ATXN7L3Q14CW9 347 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 EXOC3L2Q2M3D2 409 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 DUS1LQ6P1R4 473 aaKnown RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 CHDHQ8NE62 594 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 OR4C15Q8NGM1 316 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 ASB15Q8WXK1 588 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 TFGQ92734 400 aaPredicted RBP12.48□□□□□ -0.41
RNF43-201ENST00000407977 DHRS1Q96LJ7 313 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 RBP7Q96R05 134 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 OARD1Q9Y530 152 aa12.48□□□□□ -0.41
RNF43-201ENST00000407977 PAK4O96013 591 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms