RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CRACR2AQ9BSW2 395 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 NMNAT2Q9BZQ4 307 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 GANQ9H2C0 597 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 EPHA6Q9UF33 1036 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 C19orf25Q9UFG5 118 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 IL20RAQ9UHF4 553 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 XPO7Q9UIA9 1087 aaKnown RBP4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 TEKT2Q9UIF3 430 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 SATB2Q9UPW6 733 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 ETV7Q9Y603 341 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 COLEC10Q9Y6Z7 277 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 UMODL1Q5DID0 1318 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 RAD54L2Q9Y4B4 1467 aa4.35□□□□□ -1.71
HMGB1P13-201ENST00000406019 A8MVM7 634 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 C16orf97H3BN30 126 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 OGTO15294 1046 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 ADAM12O43184 909 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 SAP30O75446 220 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 GMNNO75496 209 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 GPIP06744 558 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 PAX1P15863 534 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 STIP1P31948 543 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 CEACAM8P31997 349 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 HSPA1LP34931 641 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 TNNT2P45379 298 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 HMGN5P82970 282 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 GABPB1Q06547 395 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 ELP6Q0PNE2 266 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 FUT7Q11130 342 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 MEF2DQ14814 521 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 ARSKQ6UWY0 536 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 LEKR1Q6ZMV7 388 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 C17orf107Q6ZR85 190 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 CDHR3Q6ZTQ4 885 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 TRMT11Q7Z4G4 463 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC43A2Q8N370 569 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 TEX26Q8N6G2 289 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 DENND6BQ8NEG7 585 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 OR52B4Q8NGK2 314 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 U2AF1L4Q8WU68 220 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 APOBEC4Q8WW27 367 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 HPSE2Q8WWQ2 592 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 ZNF606Q8WXB4 792 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 NR4A3Q92570 626 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 SLC35C1Q96A29 364 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 RAB7BQ96AH8 199 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 RAB39BQ96DA2 213 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 BPIFA2Q96DR5 249 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 MRPL53Q96EL3 112 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 C10orf90Q96M02 699 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 LPAR4Q99677 370 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 THUMPD2Q9BTF0 503 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 TEX13BQ9BXU2 312 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 VIPAS39Q9H9C1 493 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 UPF2Q9HAU5 1272 aaKnown RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 CLIP2Q9UDT6 1046 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 FAF1Q9UNN5 650 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P13-201ENST00000406019 A0A087WZY1 265 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 EEF2KO00418 725 aaKnown RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 CHEK1O14757 476 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 EPHB6O15197 1021 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 CHADO15335 359 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TXNDC12O95881 172 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 PAK4O96013 591 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 VTNP04004 478 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 KRT8P05787 483 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZCCHC18P0CG32 403 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 AMD1P17707 334 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 ACKR3P25106 362 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 CASQ1P31415 396 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 KCNK10P57789 538 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 WDR38Q5JTN6 314 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 SNRNP48Q6IEG0 339 aaKnown RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TCEAL6Q6IPX3 200 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 C16orf87Q6PH81 154 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM207Q6UWW9 146 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM26Q6ZUK4 368 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 FCRLAQ7L513 359 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TRMT1LQ7Z2T5 733 aaKnown RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 LCA5Q86VQ0 697 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 KLHDC9Q8NEP7 349 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR4C3Q8NH37 302 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 OR4L1Q8NH43 312 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 FBXO30Q8TB52 745 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 GANCQ8TET4 914 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 FAM210AQ96ND0 272 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 INPP4AQ96PE3 977 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 NEDD4LQ96PU5 975 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 CBWD1Q9BRT8 395 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 UBAC1Q9BSL1 405 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 NT5C3AQ9H0P0 336 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TSPY26PQ9H489 355 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TMEM231Q9H6L2 316 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
HMGB1P13-201ENST00000406019 TXLNGQ9NUQ3 528 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms