RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 FAM131AQ6UXB0 335 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 WASH2PQ6VEQ5 465 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 TCEANCQ8N8B7 351 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 DCAF4L2Q8NA75 395 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 TAPBPLQ9BX59 468 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 FTSJ1Q9UET6 329 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 KLK4Q9Y5K2 254 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 ANXA8P13928 327 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 PTNP21246 168 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 CRISP1P54107 249 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 VEPH1Q14D04 833 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 OR2G6Q5TZ20 316 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 Q6ZVU0 165 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 ZNF438Q7Z4V0 828 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 HSD11B1LQ7Z5J1 315 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 TAGAPQ8N103 731 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 DENND6BQ8NEG7 585 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 SORCS1Q8WY21 1168 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 UCN3Q969E3 161 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 CITED4Q96RK1 184 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 C1GALT1Q9NS00 363 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 STOX2Q9P2F5 926 aaPredicted RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 CFL2Q9Y281 166 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 PCM1Q15154 2024 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 AGAP14A8MT82 685 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 RTCAO00442 366 aaKnown RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 KLHL18O94889 574 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 CD79BP40259 229 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 TAS2R50P59544 299 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 HYAL2Q12891 473 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 HNRNPA0Q13151 305 aaKnown RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 GCNT6Q5T4J0 391 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 PPP2R2DQ66LE6 453 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 KIAA1841Q6NSI8 718 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 DNAJB7Q7Z6W7 309 aaPredicted RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 RAB43Q86YS6 212 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 OR4D11Q8NGI4 311 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 C17orf50Q8WW18 174 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 SCRN2Q96FV2 425 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 TM9SF2Q99805 663 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 ACAT2Q9BWD1 397 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 PRR14Q9BWN1 585 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 POLR2J2Q9GZM3 115 aaKnown RBP20.04■□□□□ 0.8
CTCF-202ENST00000401394 MIXL1Q9H2W2 232 aa20.04■□□□□ 0.8
CTCF-202ENST00000401394 CPNE3O75131 537 aaKnown RBP20.03■□□□□ 0.8
CTCF-202ENST00000401394 CYP2A7P20853 494 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 XCR1P46094 333 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 ATN1P54259 1190 aaPredicted RBP20.03■□□□□ 0.8
CTCF-202ENST00000401394 CDC42P60953 191 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 CDK10Q15131 360 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 RETSATQ6NUM9 610 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 TPRG1Q6ZUI0 275 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 COMTD1Q86VU5 262 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 LAS2Q8IYD9 372 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 OR2AP1Q8NGE2 309 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 WRAP53Q9BUR4 548 aaKnown RBP20.03■□□□□ 0.8
CTCF-202ENST00000401394 C2orf49Q9BVC5 232 aaPredicted RBP20.03■□□□□ 0.8
CTCF-202ENST00000401394 OR2B2Q9GZK3 357 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 TMEM161AQ9NX61 479 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 TOR4AQ9NXH8 423 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 HCN4Q9Y3Q4 1203 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 ALPK3Q96L96 1907 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 ERVH48-1M5A8F1 160 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 AKR7A2O43488 359 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 KLK1P06870 262 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 CBLP22681 906 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 SERPINA4P29622 427 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 CSNK2BP67870 215 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 C2orf80Q0P641 193 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 MLIPQ5VWP3 458 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 ZNF367Q7RTV3 350 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 COMMD6Q7Z4G1 85 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 PIP5K1AQ99755 562 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 SRRQ9GZT4 340 aa20.03■□□□□ 0.8
CTCF-202ENST00000401394 CHD7Q9P2D1 2997 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 MRPS14O60783 128 aaKnown RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 C8GP07360 202 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 ACLYP53396 1101 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 GPLD1P80108 840 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 SPHARQ15513 63 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 FBXO43Q4G163 708 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 DEF8Q6ZN54 512 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 CPA6Q8N4T0 437 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 SOCS4Q8WXH5 440 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 FCRL1Q96LA6 429 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 CCDC177Q9NQR7 707 aaPredicted RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 YIPF1Q9Y548 306 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 CLCA3PQ9Y6N3 262 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 A0A1W2PQL4 384 aaPredicted RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 NME6O75414 186 aaPredicted RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 NCR1O76036 304 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 IMPA1P29218 277 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 C19orf48Q6RUI8 117 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 B3GLCTQ6Y288 498 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 NLGN4YQ8NFZ3 816 aaPredicted RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 SCLYQ96I15 445 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 DCLRE1CQ96SD1 692 aaKnown RBP20.02■□□□□ 0.8
CTCF-202ENST00000401394 TVP23BQ9NYZ1 205 aa20.02■□□□□ 0.8
CTCF-202ENST00000401394 SCN8AQ9UQD0 1980 aa20.02■□□□□ 0.79
CTCF-202ENST00000401394 PLXND1Q9Y4D7 1925 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms