RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 UBQLNLQ8IYU4 475 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CENPSQ8N2Z9 138 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 OR56A3Q8NH54 315 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SLC7A13Q8TCU3 470 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CHFRQ96EP1 664 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PEBP4Q96S96 227 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PSMD9O00233 223 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TOR1BO14657 336 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HCKP08631 526 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HLCSP50747 726 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 UPP1Q16831 310 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 NANOGP8Q6NSW7 305 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 NOXRED1Q6NXP6 359 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PNCKQ6P2M8 343 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 ZBTB46Q86UZ6 589 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 NAA11Q9BSU3 229 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 ZNF350Q9GZX5 532 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 NANOGQ9H9S0 305 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 RDH8Q9NYR8 311 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TAS2R8Q9NYW2 309 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SLC17A6Q9P2U8 582 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 MALT1Q9UDY8 824 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HCN2Q9UL51 889 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TP53I11O14683 189 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 DBIP07108 87 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 IFI30P13284 250 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 DGKQP52824 942 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HSD17B12Q53GQ0 312 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 C7orf61Q8IZ16 206 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SIPA1Q96FS4 1042 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 METTL7AQ9H8H3 244 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 BRF2Q9HAW0 419 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 KCNIP3Q9Y2W7 256 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 NOP16Q9Y3C1 178 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 A0A0G2JPF8 293 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 B4DGG1 531 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HNRNPCL3B7ZW38 293 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SLC31A1O15431 190 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 HNRNPCL4P0DMR1 293 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 MAGEA8P43361 318 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SLC6A9P48067 706 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SCGB2B2Q4G0G5 96 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SPANXN4Q5MJ08 99 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 OR2L8Q8NGY9 312 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PLEKHO2Q8TD55 490 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 THEM6Q8WUY1 208 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TWNKQ96RR1 684 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SDHDO14521 159 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TSPAN4O14817 238 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 MMP20O60882 483 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 SNNO75324 88 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 IL7P13232 177 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CKMT2P17540 419 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 S1PR1P21453 382 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CTSOP43234 321 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 ZNF423Q2M1K9 1284 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 OR2L2Q8NH16 312 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CCDC86Q9H6F5 360 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 CD93Q9NPY3 652 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 WDR45Q9Y484 360 aa8.05□□□□□ -1.12
SPTLC3-201ENST00000399002 TRBV23OR9-2A0A075B6M9 112 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 FXYD6-FXYD2A0A087WZ82 144 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 TMEM233B4DJY2 109 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 PROM1O43490 865 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 JUNP05412 331 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 KLK3P07288 261 aaPredicted RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 BCKDHAP12694 445 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 TYRP14679 529 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 S100A10P60903 97 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 HNRNPA0Q13151 305 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 ARL6IP1Q15041 203 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 ITPRIPL2Q3MIP1 535 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 C6orf136Q5SQH8 315 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 CARM1Q86X55 608 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 IFNLR1Q8IU57 520 aaPredicted RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 MMAAQ8IVH4 418 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 SCML4Q8N228 414 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 OR8J1Q8NGP2 316 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 GPR150Q8NGU9 434 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 FAM110BQ8TC76 370 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 CAPNS2Q96L46 248 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 IL4I1Q96RQ9 567 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 POLDIP3Q9BY77 421 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 FXYD6Q9H0Q3 95 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 TREM1Q9NP99 234 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 HPF1Q9NWY4 346 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 NDRG2Q9UN36 371 aaKnown RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 FAM221BA6H8Z2 402 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 M0R129 80 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 M0R233 179 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 SYNGR4O95473 234 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 GNAO1P09471 354 aa8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 FRKP42685 505 aaPredicted RBP8.04□□□□□ -1.12
SPTLC3-201ENST00000399002 RPA4Q13156 261 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms