RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 A0A1B0GUH1 482 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ARHGAP10A1A4S6 786 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 MAN1A2O60476 641 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 MYO1DO94832 1006 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 TBX6O95947 436 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 STSP08842 583 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 EPB42P16452 691 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 CERS1P27544 350 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 TYK2P29597 1187 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 EEF1DP29692 281 aaKnown RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 SERPINB8P50452 374 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 KCNK10P57789 538 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 IRF9Q00978 393 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 SLC13A2Q13183 592 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 E2F2Q14209 437 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ACAP2Q15057 778 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 TERF2Q15554 542 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ZRSR2Q15696 482 aaKnown RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 SPINK14Q6IE38 97 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 KLC3Q6P597 504 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 RELL1Q8IUW5 271 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ZNF595Q8IYB9 648 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 CENPLQ8N0S6 344 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 FAM47BQ8NA70 645 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 TMEM178AQ8NBL3 297 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 NFAM1Q8NET5 270 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 B3GNT7Q8NFL0 401 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ACSS3Q9H6R3 686 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 KLHL1Q9NR64 748 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 PNO1Q9NRX1 252 aaKnown RBP12.54□□□□□ -0.4
VCX3A-202ENST00000398729 NINJ2Q9NZG7 142 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 DAPP1Q9UN19 280 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
VCX3A-202ENST00000398729 PCNX1Q96RV3 2341 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 A0A096LPK6 155 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 HMX2A2RU54 273 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 FCHO1O14526 889 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 KLHL2O95198 593 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 PCNAP12004 261 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 MTHFD2P13995 350 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 GFAPP14136 432 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 MST1P26927 711 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 TPP2P29144 1249 aaPredicted RBP12.53□□□□□ -0.4
VCX3A-202ENST00000398729 SERPINB1P30740 379 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 CYB561P49447 251 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 CLCN2P51788 898 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 LIM2P55344 173 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 PMP22Q01453 160 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 PCDH1Q08174 1060 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 CHSY3Q70JA7 882 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 LAS2Q8IYD9 372 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 TEX9Q8N6V9 391 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 FAM98AQ8NCA5 519 aaKnown RBP12.53□□□□□ -0.4
VCX3A-202ENST00000398729 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
VCX3A-202ENST00000398729 IFT81Q8WYA0 676 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 SCMH1Q96GD3 660 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 FMO2Q99518 471 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 TBCDQ9BTW9 1192 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 ADAP2Q9NPF8 381 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 PRDM7Q9NQW5 492 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 SEC14L3Q9UDX4 400 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 ADGRE2Q9UHX3 823 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 DMGDHQ9UI17 866 aaKnown RBP12.53□□□□□ -0.4
VCX3A-202ENST00000398729 SPACA6W5XKT8 324 aa12.53□□□□□ -0.4
VCX3A-202ENST00000398729 TRBV11-1A0A0K0K1C0 115 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 CYR61O00622 381 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 ZG16O60844 167 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 NEURL1O76050 574 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 UNC5CO95185 931 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 ACSL3O95573 720 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 MLYCDO95822 493 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 TGFB1P01137 390 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
VCX3A-202ENST00000398729 TUBB4AP04350 444 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 SP1P08047 785 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 INHBAP08476 426 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 CTAGE8P0CG41 777 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.41
VCX3A-202ENST00000398729 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.41
VCX3A-202ENST00000398729 MLF1P58340 268 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 RBPJQ06330 500 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 NAA30Q147X3 362 aaPredicted RBP12.52□□□□□ -0.41
VCX3A-202ENST00000398729 SETDB1Q15047 1291 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 PFKFB4Q16877 469 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 AP5B1Q2VPB7 878 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.41
VCX3A-202ENST00000398729 GRHL2Q6ISB3 625 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 SLC25A25Q6KCM7 469 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 TAOK1Q7L7X3 1001 aa12.52□□□□□ -0.41
VCX3A-202ENST00000398729 GALNTL5Q7Z4T8 443 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms