RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 INO80DQ53TQ3 878 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TANGO2Q6ICL3 276 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TEX261Q6UWH6 196 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 Q6ZNB5 142 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 COMMD7Q86VX2 200 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 BTN2A2Q8WVV5 523 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 FGF14Q92915 247 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TESCQ96BS2 214 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 AP2M1Q96CW1 435 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 OR5M11Q96RB7 305 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 MGLLQ99685 303 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 C1QTNF3Q9BXJ4 246 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 GABARAPL3Q9BY60 117 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 PLA2G2FQ9BZM2 168 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 EXOSC4Q9NPD3 245 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZC4H2Q9NQZ6 224 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 RAD18Q9NS91 495 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TAS2R16Q9NYV7 291 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 U3KQ87 197 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 NUMA1Q14980 2115 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 DENND4CQ5VZ89 1909 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 WASHC1A8K0Z3 465 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 WASH3PC4AMC7 463 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 MATN3O15232 486 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 FGF10O15520 208 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 FABP3P05413 133 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 HOXD4P09016 255 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 GPC1P35052 558 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ALDH6A1Q02252 535 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 IKZF1Q13422 519 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 RIN1Q13671 783 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 KCNC3Q14003 757 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 EIF4HQ15056 248 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TSNQ15631 228 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 SSX1Q16384 188 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 RFTN2Q52LD8 501 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 SHEQ5VZ18 495 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TYW3Q6IPR3 259 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 IL27RAQ6UWB1 636 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF605Q86T29 641 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 GLCCI1Q86VQ1 547 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 UMODL1-AS1Q8N2C9 162 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF680Q8NEM1 530 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 OVCA2Q8WZ82 227 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ESAMQ96AP7 390 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 MRPL38Q96DV4 380 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF578Q96N58 590 aaPredicted RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 HBEGFQ99075 208 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 SEMA3CQ99985 751 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 PPIL3Q9H2H8 161 aaKnown RBP9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 SNTG1Q9NSN8 517 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 MCUBQ9NWR8 336 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 MAPRE3Q9UPY8 281 aa9.72□□□□□ -0.85
HMGCLL1-205ENST00000398661 TRBV5-3A0A0A0MS03 114 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 H3BM21 787 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 CDC7O00311 574 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 INSIG1O15503 277 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 GPR39O43194 453 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 HOXB8P17481 243 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 LTBRP36941 435 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 MAP2K3P46734 347 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ERVPABLB-1P60509 514 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 RUNX1T1Q06455 604 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 LMAN2Q12907 356 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 BAMBIQ13145 260 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 POU4F3Q15319 338 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ANGPT1Q15389 498 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 HKDC1Q2TB90 917 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 SPANXN4Q5MJ08 99 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 IER5LQ5T953 404 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 MARC1Q5VT66 337 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 LRRC66Q68CR7 880 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 TMEM215Q68D42 235 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 OR4F3Q6IEY1 312 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 METTL2BQ6P1Q9 378 aaKnown RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 KDELC1Q6UW63 502 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 KIAA1324Q6UXG2 1013 aaKnown RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ADGRG2Q8IZP9 1017 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 C9orf43Q8TAL5 461 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 AKAP1Q92667 903 aaKnown RBP eCLIP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 MYADMQ96S97 322 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 CPPED1Q9BRF8 314 aaPredicted RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 DERL2Q9GZP9 239 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 REEP1Q9H902 201 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ARNT2Q9HBZ2 717 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 SLC6A13Q9NSD5 602 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 THUMPD1Q9NXG2 353 aaKnown RBP9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ATP6V1HQ9UI12 483 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 KCTD3Q9Y597 815 aa9.71□□□□□ -0.85
HMGCLL1-205ENST00000398661 ZDBF2Q9HCK1 2354 aa9.71□□□□□ -0.86
HMGCLL1-205ENST00000398661 FABP12A6NFH5 140 aa9.71□□□□□ -0.86
HMGCLL1-205ENST00000398661 GFRA2O00451 464 aa9.71□□□□□ -0.86
HMGCLL1-205ENST00000398661 KCNJ13O60928 360 aa9.71□□□□□ -0.86
HMGCLL1-205ENST00000398661 CCNDBP1O95273 360 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms