RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GSTA1P08263 222 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 HIST1H1TP22492 207 aaPredicted RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 HSD17B3P37058 310 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 HSD17B7P56937 341 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 RPS13P62277 151 aaKnown RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 TGM3Q08188 693 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 ZRSR2Q15696 482 aaKnown RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 GGTA1PQ4G0N0 100 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 WDR93Q6P2C0 686 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 ZNF595Q8IYB9 648 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 CPT1CQ8TCG5 803 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 ELP5Q8TE02 316 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 AENQ8WTP8 325 aaKnown RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 LPAR4Q99677 370 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 SORBS1Q9BX66 1292 aaKnown RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 ROGDIQ9GZN7 287 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 RNF32Q9H0A6 362 aa15.65■□□□□ 0.1
APTR-201ENST00000398043 PPIEQ9UNP9 301 aaKnown RBP15.65■□□□□ 0.1
APTR-201ENST00000398043 SAP18O00422 153 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 TSFMP43897 325 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 NEK2P51955 445 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 HERVK_113P63132 956 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 ACTN3Q08043 901 aaPredicted RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 CUL3Q13618 768 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 DDX39BQ13838 428 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 UNC50Q53HI1 259 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 OR4C11Q6IEV9 310 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 LETMD1Q6P1Q0 360 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 MYLK4Q86YV6 388 aaPredicted RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 FAM47BQ8NA70 645 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 CATSPER1Q8NEC5 780 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 OR4F6Q8NGB9 312 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 DNAJB14Q8TBM8 379 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 EPS8L3Q8TE67 593 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 RGMAQ96B86 450 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 REPS1Q96D71 796 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 SNRNP40Q96DI7 357 aaKnown RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 TMEM237Q96Q45 408 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 ERVK-6Q9BXR3 956 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 COPS7BQ9H9Q2 264 aaPredicted RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 SEMA4BQ9NPR2 832 aaPredicted RBP15.64■□□□□ 0.09
APTR-201ENST00000398043 SLAMF7Q9NQ25 335 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 PRTFDC1Q9NRG1 225 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 NTNG1Q9Y2I2 539 aa15.64■□□□□ 0.09
APTR-201ENST00000398043 USP9XQ93008 2570 aaPredicted RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 SAGE2PA6NJ88 616 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 NUDT17P0C025 328 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 PTX3P26022 381 aaPredicted RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 BSGP35613 385 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 SLCO1A2P46721 670 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 GPR143P51810 404 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 CCNG1P51959 295 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 CDH13P55290 713 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 KCNC4Q03721 635 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 TERF2Q15554 542 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 AP5B1Q2VPB7 878 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 ZNF678Q5SXM1 525 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 FAM219BQ5XKK7 198 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 MRM1Q6IN84 353 aaKnown RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 IQCKQ8N0W5 287 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 ARMC10Q8N2F6 343 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 ZCCHC7Q8N3Z6 543 aaKnown RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 APCDD1LQ8NCL9 501 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 L3HYPDHQ96EM0 354 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 C19orf60Q96EN9 201 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 ILKAPQ9H0C8 392 aaPredicted RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 CLMPQ9H6B4 373 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 DDX31Q9H8H2 851 aaKnown RBP15.63■□□□□ 0.09
APTR-201ENST00000398043 PLA2G3Q9NZ20 509 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 DCDC2Q9UHG0 476 aa15.63■□□□□ 0.09
APTR-201ENST00000398043 GTF3C1Q12789 2109 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 A0A0A6YYD5 115 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CLEC18AA5D8T8 446 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 G3V2L1 256 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CLDN4O14493 209 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 MAN1A2O60476 641 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CTNSO60931 367 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 WDPCPO95876 746 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 TSPAN8P19075 237 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 TAC1P20366 129 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 IMPDH1P20839 514 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 ATP5F1P24539 256 aaPredicted RBP15.62■□□□□ 0.09
APTR-201ENST00000398043 PPP2R1BP30154 601 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 SSR2P43308 183 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 TNFSF10P50591 281 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 PRKAA2P54646 552 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CLCQ05315 142 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 ZNF169Q14929 603 aaPredicted RBP15.62■□□□□ 0.09
APTR-201ENST00000398043 TLR1Q15399 786 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 ACER2Q5QJU3 275 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 FRG2Q64ET8 278 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CLEC18BQ6UXF7 455 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 MILR1Q7Z6M3 343 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CRLF3Q8IUI8 442 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 KIF2BQ8N4N8 673 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 CISD2Q8N5K1 135 aaKnown RBP15.62■□□□□ 0.09
APTR-201ENST00000398043 CLEC18CQ8NCF0 446 aa15.62■□□□□ 0.09
APTR-201ENST00000398043 GALNT11Q8NCW6 608 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms