RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 LRRC58Q96CX6 371 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 CCDC74BQ96LY2 380 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 PRPF18Q99633 342 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 IRF2BPLQ9H1B7 796 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 LYARQ9NX58 379 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 KCMF1Q9P0J7 381 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 SH3BP4Q9P0V3 963 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 FBXW2Q9UKT8 454 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 RRP15Q9Y3B9 282 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 CFAP73A6NFT4 308 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 D6RAR5 112 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 TBX19O60806 448 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 CORO7P57737 925 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 PLIN5Q00G26 463 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 ANKRD46Q86W74 232 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 TICAM1Q8IUC6 712 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 DTWD1Q8N5C7 304 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 RCBTB1Q8NDN9 531 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 N4BP2L2Q92802 583 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-203ENST00000397442 FAM120CQ9NX05 1096 aaKnown RBP26.04■■□□□ 1.76
CPNE1-203ENST00000397442 CROTQ9UKG9 612 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 MAN2B2Q9Y2E5 1009 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 NAALAD2Q9Y3Q0 740 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 NEUROG3Q9Y4Z2 214 aa26.04■■□□□ 1.76
CPNE1-203ENST00000397442 A0A088AWK7 358 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 C4orf47A7E2U8 309 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 TMEM150CB9EJG8 249 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 PROM1O43490 865 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 ZNF10P21506 573 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 PSME3P61289 254 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 TMTC4Q5T4D3 741 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 OR1L3Q8NH93 324 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 ZNF764Q96H86 408 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 THTPAQ9BU02 230 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 BHLHE41Q9C0J9 482 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 MIEF1Q9NQG6 463 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 GID8Q9NWU2 228 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 ERVK-11Q9UQG0 969 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 COL27A1Q8IZC6 1860 aaPredicted RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 HYKKA2RU49 373 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 ZNF860A6NHJ4 632 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 B3GALT2O43825 422 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 PRKRAO75569 313 aaKnown RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 NPPAP01160 153 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 DRD2P14416 443 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 PGM1P36871 562 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 CAPRIN1Q14444 709 aaKnown RBP26.03■■□□□ 1.76
CPNE1-203ENST00000397442 MUM1Q2TAK8 710 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 C18orf63Q68DL7 685 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 DHDDSQ86SQ9 333 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 MCUR1Q96AQ8 359 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 MIEF2Q96C03 454 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 CLPTM1LQ96KA5 538 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 INPP5KQ9BT40 448 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 DAPP1Q9UN19 280 aa26.03■■□□□ 1.76
CPNE1-203ENST00000397442 FOXS1O43638 330 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 GUCY1B2O75343 617 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 AIFM1O95831 613 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 PTPN6P29350 595 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 ALDH9A1P49189 494 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 LIM2P55344 173 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 OLR1P78380 273 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 GARNL3Q5VVW2 1013 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 KIAA2013Q8IYS2 634 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 SHISA5Q8N114 240 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 FAM47BQ8NA70 645 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 OR9A4Q8NGU2 314 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 ZNF501Q96CX3 271 aaPredicted RBP26.02■■□□□ 1.76
CPNE1-203ENST00000397442 RMND5AQ9H871 391 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 SLC6A13Q9NSD5 602 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 ATAD3AQ9NVI7 634 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 C5AR2Q9P296 337 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 PCDHA9Q9Y5H5 950 aa26.02■■□□□ 1.76
CPNE1-203ENST00000397442 WASHC1A8K0Z3 465 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 OR2B3O76000 313 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 HOXB9P17482 250 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 EFNA1P20827 205 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 GCGRP47871 477 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 EMP3P54852 163 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 FAM53BQ14153 422 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 GRM7Q14831 915 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 AASDHQ4L235 1098 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 C6orf10Q5SRN2 563 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 CLECL1Q8IZS7 167 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 EFCAB3Q8N7B9 438 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 CIDECQ96AQ7 238 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 ITCHQ96J02 903 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 HOPXQ9BPY8 73 aaPredicted RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 FAIM2Q9BWQ8 316 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 PAIP1Q9H074 479 aaKnown RBP26.01■■□□□ 1.75
CPNE1-203ENST00000397442 ANKHQ9HCJ1 492 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 FGF21Q9NSA1 209 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 IRAK4Q9NWZ3 460 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 TAS2R7Q9NYW3 318 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 EHD3Q9NZN3 535 aa26.01■■□□□ 1.75
CPNE1-203ENST00000397442 PRSS51A0A1B0GVH4 220 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 SGK494L7N484 410 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 GDF9O60383 454 aa26■■□□□ 1.75
CPNE1-203ENST00000397442 KCNH1O95259 989 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms