RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLAMF7Q9NQ25 335 aa16■□□□□ 0.15
NUP50-202ENST00000396096 ZBTB32Q9Y2Y4 487 aaPredicted RBP16■□□□□ 0.15
NUP50-202ENST00000396096 TESMINQ9Y4I5 508 aa16■□□□□ 0.15
NUP50-202ENST00000396096 DOCK9Q9BZ29 2069 aa16■□□□□ 0.15
NUP50-202ENST00000396096 RTCAO00442 366 aaKnown RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 PDPK1O15530 556 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 NDUFS4O43181 175 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CLEC3AO75596 197 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ANXA8P13928 327 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CD6P30203 668 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 XCR1P46094 333 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 STT3AP46977 705 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 RPS21P63220 83 aaKnown RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 CSNK1G2P78368 415 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 SLC16A12Q6ZSM3 486 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ARHGAP22Q7Z5H3 698 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CACUL1Q86Y37 369 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 TBC1D15Q8TC07 691 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CAMK1GQ96NX5 476 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 FERD3LQ96RJ6 166 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CSF3RQ99062 836 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 MYOCQ99972 504 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 KXD1Q9BQD3 176 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 FUNDC2Q9BWH2 189 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 RAB11FIP5Q9BXF6 653 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 NEUROD4Q9HD90 331 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 TMEM184CQ9NVA4 438 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ERVK-18Q9QC07 812 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ENPP5Q9UJA9 477 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 SLC17A4Q9Y2C5 497 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PCDHGA10Q9Y5H3 936 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 HEATR5BQ9P2D3 2071 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 FEZF1A0PJY2 475 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 NDUFS2O75306 463 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PAK4O96013 591 aaPredicted RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 ACP5P13686 325 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 CD247P20963 164 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PKLRP30613 574 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 GDI1P31150 447 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 KIR2DL1P43626 348 aaPredicted RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 LIMS1P48059 325 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 RAB28P51157 221 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 HMGA2P52926 109 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PRDX1Q06830 199 aaKnown RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 NPTX1Q15818 432 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 MICAQ29983 383 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 REEP3Q6NUK4 255 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 UBE3DQ7Z6J8 389 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 ZNF605Q86T29 641 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 DNAJC5GQ8N7S2 189 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 OR10G2Q8NGC3 310 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 OR2L8Q8NGY9 312 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 IPCEF1Q8WWN9 437 aaPredicted RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 TANKQ92844 425 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 C12orf66Q96MD2 445 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 SIGLEC11Q96RL6 698 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 TMEM121BQ9BXQ6 578 aaPredicted RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 BTBD1Q9H0C5 482 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 DDX31Q9H8H2 851 aaKnown RBP15.99■□□□□ 0.15
NUP50-202ENST00000396096 TAS2R7Q9NYW3 318 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PCDHGA6Q9Y5G7 932 aa15.99■□□□□ 0.15
NUP50-202ENST00000396096 PLRG1O43660 514 aaKnown RBP15.98■□□□□ 0.15
NUP50-202ENST00000396096 WBP4O75554 376 aaKnown RBP15.98■□□□□ 0.15
NUP50-202ENST00000396096 INMTO95050 263 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 CEACAM5P06731 702 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 INHBBP09529 407 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 TNFRSF1BP20333 461 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 HTR1BP28222 390 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 MVKQ03426 396 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 MLC1Q15049 377 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 ANKRD54Q6NXT1 300 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 TTLQ8NG68 377 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 PSMA8Q8TAA3 256 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 CREB3L4Q8TEY5 395 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 FEVQ99581 238 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 PIP5K1AQ99755 562 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 DGCR6LQ9BY27 220 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 IGFLR1Q9H665 355 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 ACSS1Q9NUB1 689 aaPredicted RBP15.98■□□□□ 0.15
NUP50-202ENST00000396096 POFUT2Q9Y2G5 429 aa15.98■□□□□ 0.15
NUP50-202ENST00000396096 IGKV1-8A0A0C4DH67 115 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PRAMEF33A0A0G2JMD5 474 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 TRBC2A0A5B9 178 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 K7EQS6 105 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 OR1F1O43749 312 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 TMPRSS11DO60235 418 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PRAMEF10O60809 474 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 KRT20P35900 424 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 GGT2P36268 569 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PBX2P40425 430 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 OR1E2P47887 323 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ENTPD1P49961 510 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 MANFP55145 182 aaKnown RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 SPIBQ01892 262 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 SGCGQ13326 291 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 SYT6Q5T7P8 510 aaPredicted RBP15.97■□□□□ 0.15
NUP50-202ENST00000396096 MLIPQ5VWP3 458 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 PRSS48Q7RTY5 328 aa15.97■□□□□ 0.15
NUP50-202ENST00000396096 ENTHD1Q8IYW4 607 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms