RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PMF1-BGLAPU3KQ54 211 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 C2orf92A0A1B0GVN3 265 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 EIF3FO00303 357 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TP53I11O14683 189 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 AK1P00568 194 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 GBAP04062 536 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 RHCEP18577 417 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 S100A2P29034 98 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 ERP29P30040 261 aaKnown RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PREPP48147 710 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM35AQ53FP2 167 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 FAM76BQ5HYJ3 339 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC2A7Q6PXP3 512 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SERINC5Q86VE9 423 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 CCDC116Q8IYX3 515 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 LNX2Q8N448 690 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 PDE7BQ9NP56 450 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 MEPEQ9NQ76 525 aaPredicted RBP5.26□□□□□ -1.57
VPS13C-204ENST00000395898 SLC2A6Q9UGQ3 507 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 TTC3P53804 2025 aa5.26□□□□□ -1.57
VPS13C-204ENST00000395898 A0A1B0GVI7 797 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PEX10O60683 326 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RPP14O95059 124 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 DRD2P14416 443 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 XRCC1P18887 633 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HNF1BP35680 557 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PTGR1Q14914 329 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TICAM1Q8IUC6 712 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NUP43Q8NFH3 380 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ARMC5Q96C12 935 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PKP2Q99959 881 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RNF39Q9H2S5 420 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 AMBNQ9NP70 447 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SLC17A6Q9P2U8 582 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NPIPA2E9PIF3 369 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NPIPA3F8WFD2 350 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OXSR1O95747 527 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HRGP04196 525 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF33BQ06732 778 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 FGL1Q08830 312 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 EIF4HQ15056 248 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF404Q494X3 552 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HSDL2Q6YN16 418 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NRROSQ86YC3 692 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ALDH16A1Q8IZ83 802 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NINJ1Q92982 152 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 BIRC7Q96CA5 298 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 P2RY13Q9BPV8 354 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MMP27Q9H306 513 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SLC7A11Q9UPY5 501 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 M0R129 80 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ERCC1P07992 297 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CFHP08603 1231 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GJA1P17302 382 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CCNOP22674 350 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 UGT2B10P36537 528 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TSTQ16762 297 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM135Q86UB9 458 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MARCH9Q86YJ5 346 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PLXDC1Q8IUK5 500 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 LRRC25Q8N386 305 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF709Q8N972 641 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR5M3Q8NGP4 307 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NSMAFQ92636 917 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 IGSF21Q96ID5 467 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 LRCH3Q96II8 777 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HSH2DQ96JZ2 352 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SIGLEC10Q96LC7 697 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C16orf70Q9BSU1 422 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 KATNBL1Q9H079 304 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 LAMB1P07942 1786 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C6orf47O95873 294 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ITGB1P05556 798 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RORAP35398 523 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RPL6Q02878 288 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TECRLQ5HYJ1 363 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C6orf136Q5SQH8 315 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SSX6Q7RTT6 188 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF384Q8TF68 577 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NELFAQ9H3P2 528 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 BRF2Q9HAW0 419 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PRTFDC1Q9NRG1 225 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NOP16Q9Y3C1 178 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GJE1A6NN92 205 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 A8MUA0 341 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM233B4DJY2 109 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SOX1O00570 391 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 DLGAP1O14490 977 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MAFKO60675 156 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SLC19A2O60779 497 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CH25HO95992 272 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 PAK4O96013 591 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ASGR2P07307 311 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 VAMP1P23763 118 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HTR1EP28566 365 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 KCNJ5P48544 419 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ARSFP54793 590 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GPX6P59796 221 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 POU6F2P78424 691 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms