RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CRYGSP22914 178 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 CTNNA2P26232 953 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 PPP2R1BP30154 601 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 PIGAP37287 484 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 FOXF2Q12947 444 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 KLHL38Q2WGJ6 581 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 RHOT2Q8IXI1 618 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 OR52K1Q8NGK4 314 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 PEX13Q92968 403 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 FAM118BQ9BPY3 351 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 PIGQQ9BRB3 760 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 ZFP64Q9NPA5 681 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 FAM114A2Q9NRY5 505 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 TSR3Q9UJK0 312 aaKnown RBP12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 MMACHCQ9Y4U1 282 aa12.55□□□□□ -0.4
VCPKMT-201ENST00000395859 GFYI3L273 518 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 CD3EAPO15446 510 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 SPRY1O43609 319 aaPredicted RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 TMCC2O75069 709 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 NIPSNAP2O75323 286 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 STK10O94804 968 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 CATP04040 527 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 SMIM10L1P0DMW3 83 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 DUSP8Q13202 625 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 PWP1Q13610 501 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 RNF187Q5TA31 235 aaPredicted RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 NIPAL1Q6NVV3 410 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 MED12LQ86YW9 2145 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 REXO1L1PQ8IX06 675 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 RASGEF1CQ8N431 466 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 PPHLN1Q8NEY8 458 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 SMIM10Q96HG1 83 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 CCDC42Q96M95 316 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 PLA2G12AQ9BZM1 189 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 CALHM2Q9HA72 323 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 ABCF3Q9NUQ8 709 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 SAMD15Q9P1V8 674 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 MED12Q93074 2177 aa12.54□□□□□ -0.4
VCPKMT-201ENST00000395859 A8MV72 311 aaPredicted RBP12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 A8MXE2 369 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 SPOPO43791 374 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 CEP104O60308 925 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 P04436 131 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 ADRA1DP25100 572 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 CDH17Q12864 832 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 LYPD8Q6UX82 237 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 OR8K3Q8NH51 312 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 PAQR8Q8TEZ7 354 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 ASB11Q8WXH4 323 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 LPGAT1Q92604 370 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 PIK3IP1Q96FE7 263 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 GOLPH3Q9H4A6 298 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 EFR3BQ9Y2G0 817 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 TCAF1Q9Y4C2 921 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 WIF1Q9Y5W5 379 aa12.53□□□□□ -0.4
VCPKMT-201ENST00000395859 C4orf51C9J302 202 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 PJA2O43164 708 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 NDUFS4O43181 175 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 TP53P04637 393 aaPredicted RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 ZNF888P0CJ79 500 aaPredicted RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 RNH1P13489 461 aaKnown RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 SOX18P35713 384 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 GRIA1P42261 906 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 SLCO1A2P46721 670 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 TRPC1P48995 793 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 ATP5J2P56134 94 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 TBPL1P62380 186 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 SKP1P63208 163 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 PRAMEP78395 509 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 P3H1Q32P28 736 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 BBS9Q3SYG4 887 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 CYHR1Q6ZMK1 362 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 PLEKHM3Q6ZWE6 761 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 STRA8Q7Z7C7 330 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 ADGRE4PQ86SQ3 457 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 LUZP2Q86TE4 346 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 LINC00523Q86TU6 105 aa12.52□□□□□ -0.41
VCPKMT-201ENST00000395859 SPNS2Q8IVW8 549 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms