RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KIF18AQ8NI77 898 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 REPS1Q96D71 796 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CMTM7Q96FZ5 175 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 SIGLEC12Q96PQ1 595 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CDC42EP4Q9H3Q1 356 aaKnown RBP12.86□□□□□ -0.35
CXCL12-205ENST00000395794 ACTR8Q9H981 624 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 DAPP1Q9UN19 280 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 ASB1Q9Y576 335 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 PCDHGA11Q9Y5H2 935 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CLCA3PQ9Y6N3 262 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 TRBV11-1A0A0K0K1C0 115 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MAN1A2O60476 641 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 CTNSO60931 367 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 UNC5CO95185 931 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 TGFB1P01137 390 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 SP1P08047 785 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 EPORP19235 508 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 TNNI3P19429 210 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 TPP2P29144 1249 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 ARL1P40616 181 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 SSR2P43308 183 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 RAP1GDS1P52306 607 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 CASP6P55212 293 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 KCNK10P57789 538 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MLF1P58340 268 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 PCDH1Q08174 1060 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 DDX39BQ13838 428 aaKnown RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 SETDB1Q15047 1291 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MAPKAPK3Q16644 382 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 LIPJQ5W064 366 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 GRHL2Q6ISB3 625 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 CLNKQ7Z7G1 428 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 SCUBE1Q8IWY4 988 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 NFAM1Q8NET5 270 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 OR7G3Q8NG95 312 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 VMP1Q96GC9 406 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 NPAS2Q99743 824 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 PRDM7Q9NQW5 492 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 CPSF2Q9P2I0 782 aaKnown RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 DMGDHQ9UI17 866 aaKnown RBP12.85□□□□□ -0.35
CXCL12-205ENST00000395794 FBXW2Q9UKT8 454 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 TMCO1Q9UM00 188 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 ESPL1Q14674 2120 aa12.85□□□□□ -0.35
CXCL12-205ENST00000395794 HMX2A2RU54 273 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 POC1B-GALNT4F8VUJ3 575 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 CYR61O00622 381 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SH3BGRLO75368 114 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SLC25A12O75746 678 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ZFAND5O76080 213 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 TBX6O95947 436 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ALDOAP04075 364 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 STSP08842 583 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 RBP1P09455 135 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 RNF224P0DH78 156 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 MTHFD2P13995 350 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 HIST1H1TP22492 207 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ATP5A1P25705 553 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 CNTFP26441 200 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 PIK3CBP42338 1070 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ST13P50502 369 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 HLCSP50747 726 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 TDGF1P3P51864 188 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 PMP22Q01453 160 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ALDH6A1Q02252 535 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SERTAD2Q14140 314 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 E2F2Q14209 437 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ELAVL1Q15717 326 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 LGSNQ5TDP6 509 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 METTL2BQ6P1Q9 378 aaKnown RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 TMEM156Q8N614 296 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ACOT4Q8N9L9 421 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SLC44A1Q8WWI5 657 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 RGMAQ96B86 450 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 TRIM44Q96DX7 344 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SCMH1Q96GD3 660 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 SCYL1Q96KG9 808 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 FUT8Q9BYC5 575 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
CXCL12-205ENST00000395794 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.35
CXCL12-205ENST00000395794 A0A087WUV0 522 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-205ENST00000395794 TRGV8A0A0C4DH27 118 aa12.83□□□□□ -0.36
CXCL12-205ENST00000395794 CYSRT1A8MQ03 144 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms