RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 RTCAO00442 366 aaKnown RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 CDK2AP1O14519 115 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 ITGA10O75578 1167 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 TFEBP19484 476 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 SPRP35270 261 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 RFC3P40938 356 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 MEOX1P50221 254 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 CLCN2P51788 898 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 MTTPP55157 894 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 SLC13A2Q13183 592 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 CHIT1Q13231 466 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 GRTP1Q5TC63 336 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 BNC2Q6ZN30 1099 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 LRRC70Q7Z2Q7 622 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 ISCA2Q86U28 154 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF595Q8IYB9 648 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 FAM98AQ8NCA5 519 aaKnown RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 FBF1Q8TES7 1133 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 SREK1Q8WXA9 508 aaKnown RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 VMP1Q96GC9 406 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 EFCAB11Q9BUY7 163 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 CD244Q9BZW8 370 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 ADAP2Q9NPF8 381 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 KCMF1Q9P0J7 381 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 FBXW2Q9UKT8 454 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 KLF2Q9Y5W3 355 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
CXCL12-204ENST00000395793 FBN2P35556 2912 aa16.8■□□□□ 0.28
CXCL12-204ENST00000395793 APCP25054 2843 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 UBXN8O00124 270 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 FCHO1O14526 889 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 SH3BGRLO75368 114 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF24P17028 368 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 PTGER1P34995 402 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 MAGEA4P43358 317 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 IRF8Q02556 426 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 GUCY2DQ02846 1103 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 SLMAPQ14BN4 828 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 UBAP2Q5T6F2 1119 aaKnown RBP16.79■□□□□ 0.28
CXCL12-204ENST00000395793 RPTNQ6XPR3 784 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 MDGA2Q7Z553 956 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 SULF2Q8IWU5 870 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 SRRM1Q8IYB3 904 aaKnown RBP16.79■□□□□ 0.28
CXCL12-204ENST00000395793 RNF175Q8N4F7 328 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
CXCL12-204ENST00000395793 LIN28AQ9H9Z2 209 aaKnown RBP16.79■□□□□ 0.28
CXCL12-204ENST00000395793 NUDT4Q9NZJ9 180 aa16.79■□□□□ 0.28
CXCL12-204ENST00000395793 A0A088AWK7 358 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CLDN4O14493 209 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 MLYCDO95822 493 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF10P21506 573 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 HTR1EP28566 365 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CASQ1P31415 396 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CASP2P42575 452 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 MSH2P43246 934 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 NR0B1P51843 470 aaKnown RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 IRF9Q00978 393 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 TBCCQ15814 346 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF630Q2M218 657 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 MTFR2Q6P444 385 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CENPLQ8N0S6 344 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CYP4Z2PQ8N1L4 340 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 GHDCQ8N2G8 530 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 UBTD2Q8WUN7 234 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 KCTD4Q8WVF5 259 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 TMEM125Q96AQ2 219 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 NXNL1Q96CM4 212 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 MAPKAP1Q9BPZ7 522 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 COPS7BQ9H9Q2 264 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 MEMO1Q9Y316 297 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 UTP11Q9Y3A2 253 aaKnown RBP16.78■□□□□ 0.28
CXCL12-204ENST00000395793 CSMD1Q96PZ7 3565 aa16.78■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF407Q9C0G0 2248 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ESYT3A0FGR9 886 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 HMX2A2RU54 273 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ADAM10O14672 748 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 CTNSO60931 367 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 KERAO60938 352 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 LDB3O75112 727 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 SUPT3HO75486 399 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 S100BP04271 92 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 MTHFD2P13995 350 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ATP5A1P25705 553 aaKnown RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 TNFRSF8P28908 595 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 CASP6P55212 293 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 GPR85P60893 370 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 LAPTM5Q13571 262 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 BMPR2Q13873 1038 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ELAVL1Q15717 326 aaKnown RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 RAPH1Q70E73 1250 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 ZNF572Q7Z3I7 529 aaPredicted RBP16.77■□□□□ 0.28
CXCL12-204ENST00000395793 MCEMP1Q8IX19 187 aa16.77■□□□□ 0.28
CXCL12-204ENST00000395793 LAS2Q8IYD9 372 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms