RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C10orf62Q5T681 223 aaPredicted RBP18.74■□□□□ 0.59
SNCA-203ENST00000394986 CES4AQ5XG92 561 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 CLEC6AQ6EIG7 209 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 ATG14Q6ZNE5 492 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 MED25Q71SY5 747 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 HDXQ7Z353 690 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 CUZD1Q86UP6 607 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 TMEM102Q8N9M5 508 aaPredicted RBP18.74■□□□□ 0.59
SNCA-203ENST00000394986 METTL21AQ8WXB1 218 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 CNDP1Q96KN2 507 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 SEMA4CQ9C0C4 833 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 ZNF160Q9HCG1 818 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 FIS1Q9Y3D6 152 aa18.74■□□□□ 0.59
SNCA-203ENST00000394986 TMEM120BA0PK00 339 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 CYR61O00622 381 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 ATXN7O15265 892 aaPredicted RBP18.73■□□□□ 0.59
SNCA-203ENST00000394986 TMPRSS11DO60235 418 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 NPHS1O60500 1241 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 ULK1O75385 1050 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 PRKRAO75569 313 aaKnown RBP18.73■□□□□ 0.59
SNCA-203ENST00000394986 CRCPO75575 148 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 SEMA3DO95025 777 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 DHRS4L1P0CG22 281 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 RRADP55042 308 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 HNRNPH2P55795 449 aaKnown RBP18.73■□□□□ 0.59
SNCA-203ENST00000394986 HMGCS1Q01581 520 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 SLAMF1Q13291 335 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 KCNAB2Q13303 367 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 PCOLCEQ15113 449 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 NSDHLQ15738 373 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 ANKRD37Q7Z713 158 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 NUDCD3Q8IVD9 361 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 EFCAB3Q8N7B9 438 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 FER1L6-AS2Q96M78 137 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 PTCHD1Q96NR3 888 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 ACPTQ9BZG2 426 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 LYRM4Q9HD34 91 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 NECTIN3Q9NQS3 549 aa18.73■□□□□ 0.59
SNCA-203ENST00000394986 LOC102723996A0A087X1L8 192 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 IGHV1-45A0A0A0MS14 117 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 A0A0A6YYD5 115 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 TMEM233B4DJY2 109 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 TGFBR3LH3BV60 316 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 PRMT3O60678 531 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 SEC24DO94855 1032 aaPredicted RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 ZWINTO95229 277 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 TSFMP43897 325 aaKnown RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 Q0VFX4 171 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 TBL3Q12788 808 aaKnown RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 RCN2Q14257 317 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 ARL13AQ5H913 290 aaPredicted RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 QSOX2Q6ZRP7 698 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 CLNKQ7Z7G1 428 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 NUDT13Q86X67 352 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 METTL4Q8N3J2 472 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 ZCCHC7Q8N3Z6 543 aaKnown RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 CLEC1AQ8NC01 280 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 PLPP5Q8NEB5 264 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 MGARPQ8TDB4 240 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 PAIP2Q9BPZ3 127 aaKnown RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 TRMOQ9BU70 441 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 DDX31Q9H8H2 851 aaKnown RBP18.72■□□□□ 0.59
SNCA-203ENST00000394986 BRF2Q9HAW0 419 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 PTGDR2Q9Y5Y4 395 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 PIEZO2Q9H5I5 2752 aa18.72■□□□□ 0.59
SNCA-203ENST00000394986 ATRXP46100 2492 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 NSG1A0A0A6YYJ2 146 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 MYOCOSA0A1B0GUC4 107 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 K7EM74 188 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 SASH3O75995 380 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 HPP00738 406 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 NR1D1P20393 614 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 GALNT1Q10472 559 aaPredicted RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 CSTF3Q12996 717 aaKnown RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 CHI3L2Q15782 390 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 TTMPQ5BVD1 217 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 MRM1Q6IN84 353 aaKnown RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 COMMD6Q7Z4G1 85 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 CPEB2Q7Z5Q1 589 aaKnown RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 SCUBE1Q8IWY4 988 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 PARP9Q8IXQ6 854 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 C1orf52Q8N6N3 182 aaKnown RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 AGR3Q8TD06 166 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 ADAMTS18Q8TE60 1221 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 SREK1Q8WXA9 508 aaKnown RBP18.71■□□□□ 0.59
SNCA-203ENST00000394986 ABHD17AQ96GS6 310 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 PRDM9Q9NQV7 894 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 PRTFDC1Q9NRG1 225 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 ATG4BQ9Y4P1 393 aa18.71■□□□□ 0.59
SNCA-203ENST00000394986 NUP210LQ5VU65 1888 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 IGKV3D-11A0A0A0MRZ8 115 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 A0A1W2PQ72 361 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 AZIN1O14977 448 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
SNCA-203ENST00000394986 KLK1P06870 262 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 CELA2AP08217 269 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 CYC1P08574 325 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 UROSP10746 265 aa18.7■□□□□ 0.58
SNCA-203ENST00000394986 CPN2P22792 545 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms