RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TSPAN6O43657 245 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PI15O43692 258 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CYP17A1P05093 508 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 LCKP06239 509 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PRSS56P0CW18 603 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 OXTRP30559 389 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 AKT2P31751 481 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CA5AP35218 305 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TRIM23P36406 574 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RPL3P39023 403 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 MAP2K3P46734 347 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ARCN1P48444 511 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZNF140P52738 457 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 GALNT1Q10472 559 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 CDC20Q12834 499 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 FAPQ12884 760 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TCEA2Q15560 299 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ATP13A5Q4VNC0 1218 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CDKL4Q5MAI5 379 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 LILRA6Q6PI73 481 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 LINC00299Q6ZSB3 139 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TMPRSS11BQ86T26 416 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 LRRTM4Q86VH4 590 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZDHHC21Q8IVQ6 265 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MEIOBQ8N635 442 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 WBP2Q969T9 261 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CRELD1Q96HD1 420 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 AIF1LQ9BQI0 150 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CCDC3Q9BQI4 270 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZNF416Q9BWM5 594 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 VN1R3Q9BXE9 311 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TM9SF3Q9HD45 589 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 IL26Q9NPH9 171 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NPAP1Q9NZP6 1156 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 HS3ST2Q9Y278 367 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 POLR3HQ9Y535 204 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 PRSS44E7EML9 344 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NME4O00746 187 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 DLGAP1O14490 977 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CFL1P23528 166 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 GADD45AP24522 165 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 STOMP27105 288 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 DDOSTP39656 456 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 TPMTP51580 245 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 GPLD1P80108 840 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SNTA1Q13424 505 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SMCO1Q147U7 214 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 GPNMBQ14956 572 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TSTQ16762 297 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 UGT8Q16880 541 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ADPRMQ3LIE5 342 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 FBXO43Q4G163 708 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TCEAL5Q5H9L2 206 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TOR2AQ5JU69 321 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 HAGHLQ6PII5 290 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 DEF8Q6ZN54 512 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MRPL38Q96DV4 380 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 MCMBPQ9BTE3 642 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NLNQ9BYT8 704 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RANBP3Q9H6Z4 567 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 AKTIPQ9H8T0 292 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ENOPH1Q9UHY7 261 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PHF11Q9UIL8 331 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RPS6KA6Q9UK32 745 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 INTS6Q9UL03 887 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 MGAT4AQ9UM21 535 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RAB19A4D1S5 217 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NPIPB15A6NHN6 443 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 SGCEO43556 437 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CACNG3O60359 315 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RFPL3O75679 317 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PRAMEF12O95522 483 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ITGB8P26012 769 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SHMT2P34897 504 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 HSD17B2P37059 387 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SLC6A11P48066 632 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CDKN1CP49918 316 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 PNLIPRP1P54315 467 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 LAPTM4AQ15012 233 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 DUSP6Q16828 381 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 HNRNPA1L2Q32P51 320 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 RNASE12Q5GAN4 147 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 LCN8Q6JVE9 175 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MED27Q6P2C8 311 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ASB18Q6ZVZ8 466 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PTCHD4Q6ZW05 846 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 FGD2Q7Z6J4 655 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ISCA2Q86U28 154 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 EPHX4Q8IUS5 362 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CHCHD4Q8N4Q1 142 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 C2orf73Q8N5S3 287 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 GPR156Q8NFN8 814 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 COQ8AQ8NI60 647 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TEX47Q8TBZ9 253 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PIH1D2Q8WWB5 315 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TRIB3Q96RU7 358 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 BARD1Q99728 777 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms