RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CLINT1Q14677 625 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 PTGR1Q14914 329 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 INO80DQ53TQ3 878 aaPredicted RBP12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 TCTE1Q5JU00 501 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 WASH2PQ6VEQ5 465 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 ZNF527Q8NB42 609 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 MDGA1Q8NFP4 955 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 OR52P1PQ8NH57 321 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 OR1S1Q8NH92 325 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 GLYATL2Q8WU03 294 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 WDR89Q96FK6 387 aaPredicted RBP12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 CCDC115Q96NT0 180 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 PITX2Q99697 317 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 SIK2Q9H0K1 926 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 CFAP97Q9P2B7 532 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 SEC14L3Q9UDX4 400 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 A0A1B0GWJ7 208 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 D6RAR5 112 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 CD3EAPO15446 510 aaKnown RBP12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 CLN5O75503 358 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 CCNB2O95067 398 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 SCELO95171 688 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 IL2RBP14784 551 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 CHRNA4P43681 627 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 CHAF1BQ13112 559 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 ST3GAL2Q16842 350 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 NOMO2Q5JPE7 1267 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 C6orf136Q5SQH8 315 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM198BQ6UWH4 519 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 GPR149Q86SP6 731 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 MSRB3Q8IXL7 192 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 GPR65Q8IYL9 337 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 RAB7BQ96AH8 199 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 MSLNLQ96KJ4 702 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 C12orf66Q96MD2 445 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 ACTL8Q9H568 366 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 TMEM184CQ9NVA4 438 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 RLIMQ9NVW2 624 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 NKIRAS2Q9NYR9 191 aa12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF624Q9P2J8 865 aaPredicted RBP12.02□□□□□ -0.49
SLC28A1-203ENST00000394573 C17orf113A0A1B0GUU1 675 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 L7N2F9 121 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TERTO14746 1132 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 PIP5K1CO60331 668 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 SDC3O75056 442 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ANKRD34CP0C6C1 535 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 EDN3P14138 238 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 CYP2B6P20813 491 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 G0S2P27469 103 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 EVA1CP58658 441 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 BPIFB3P59826 476 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 MARCH8Q5T0T0 291 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ELP2Q6IA86 826 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF613Q6PF04 617 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 LIMS2Q7Z4I7 341 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 SPATA19Q7Z5L4 167 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TBC1D20Q96BZ9 403 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM120BQ96EK7 910 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TMEM209Q96SK2 561 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 SPRTNQ9H040 489 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 KCNH6Q9H252 994 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 EQTNQ9NQ60 294 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TXNL4BQ9NX01 149 aaKnown RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 CRYL1Q9Y2S2 319 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 NUP205Q92621 2012 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 DENND4AQ7Z401 1863 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 DDX6P26196 483 aaKnown RBP eCLIP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 SLC6A1P30531 599 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 GGT2P36268 569 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 AGTR2P50052 363 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ZP1P60852 638 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 OR4D1Q15615 310 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 KCNA10Q16322 511 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 SSX2Q16385 188 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 FAM174BQ3ZCQ3 159 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ZNF628Q5EBL2 1059 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 ANKRD46Q86W74 232 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 AKR7LQ8NHP1 331 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 TSPEARQ8WU66 669 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
SLC28A1-203ENST00000394573 L3HYPDHQ96EM0 354 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms