RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 PDSS2Q86YH6 399 aa10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 RNF175Q8N4F7 328 aa10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 TP53INP1Q96A56 240 aa10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 RNF31Q96EP0 1072 aa10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 ANKMY1Q9P2S6 941 aa10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
MTHFD2-201ENST00000394053 SCAMP2O15127 329 aaKnown RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NDUFAF5Q5TEU4 345 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ZNF57Q68EA5 555 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 LILRA3Q8N6C8 439 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 RFKQ969G6 155 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MACROD1Q9BQ69 325 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 PCDHGA7Q9Y5G6 932 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 DNMT3AQ9Y6K1 912 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NRG3P56975 720 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 RBBP4Q09028 425 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 CTC1Q2NKJ3 1217 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 SBSNQ6UWP8 590 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 TMEM207Q6UWW9 146 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 TMPRSS11AQ6ZMR5 421 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ADIPOR2Q86V24 386 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 JAZF1Q86VZ6 243 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 AQP11Q8NBQ7 271 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NUP43Q8NFH3 380 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 OR52E1Q8NGJ3 308 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ZDHHC1Q8WTX9 485 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 TM9SF3Q9HD45 589 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NECTIN3Q9NQS3 549 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 PRTFDC1Q9NRG1 225 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 VAPAQ9P0L0 249 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 SUSD2Q9UGT4 822 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 GPR45Q9Y5Y3 372 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MICAL3Q7RTP6 2002 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ELOA3DA6NLF2 546 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 OR2B3O76000 313 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 HSD17B1P14061 328 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 DRD2P14416 443 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ST3GAL3Q11203 375 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ELOA3BQ3SY89 546 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 TMEM164Q5U3C3 297 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ELOA3Q8NG57 546 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 HLA-CQ95604 372 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 CHCHD6Q9BRQ6 235 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 INPP5KQ9BT40 448 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 PREBQ9HCU5 417 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 CMTM6Q9NX76 183 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 CFL2Q9Y281 166 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 SHROOM3Q8TF72 1996 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ARFGEF1Q9Y6D6 1849 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 LOC100130705A0A1B0GUX0 176 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NUDT6P53370 316 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 ZXDBP98169 803 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 LRP8Q14114 963 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 RCAN2Q14206 197 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 NNATQ16517 81 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 IQCCQ4KMZ1 466 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 RSBN1Q5VWQ0 802 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 TMEM107Q6UX40 140 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 SLC29A4Q7RTT9 530 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 VRK3Q8IV63 474 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MCFD2Q8NI22 146 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MAL2Q969L2 176 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 FBXL20Q96IG2 436 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MKKSQ9NPJ1 570 aaPredicted RBP10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 OBP2AQ9NY56 170 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 POFUT2Q9Y2G5 429 aa10.19□□□□□ -0.78
MTHFD2-201ENST00000394053 GPR89AB7ZAQ6 455 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 PCDHGA12O60330 932 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TRMUO75648 421 aaKnown RBP10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 SOX14O95416 240 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 LINGO3P0C6S8 592 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 GPR89BP0CG08 455 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 ATP5A1P25705 553 aaKnown RBP10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TNFRSF4P43489 277 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 CXCL12P48061 93 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 ZNF33BQ06732 778 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TMEM126BQ8IUX1 230 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TDHQ8IZJ6 230 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 ZNF354BQ96LW1 612 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TAPBPLQ9BX59 468 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 OSBPL10Q9BXB5 764 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 SLC6A17Q9H1V8 727 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 TOR3AQ9H497 397 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 SLC35C2Q9NQQ7 365 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 CRNNQ9UBG3 495 aaPredicted RBP10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 C17orf113A0A1B0GUU1 675 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 PRSS38A1L453 326 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 FAM221BA6H8Z2 402 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 FHP07954 510 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 RNH1P13489 461 aaKnown RBP10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 PTNP21246 168 aa10.18□□□□□ -0.78
MTHFD2-201ENST00000394053 PSMB5P28074 263 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms