RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SSU72Q9NP77 194 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 PRDM9Q9NQV7 894 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 FARSBQ9NSD9 589 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 MMACHCQ9Y4U1 282 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 PCDHGA9Q9Y5G4 932 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 ACTL7BQ9Y614 415 aa17.88■□□□□ 0.45
PDLIM7-204ENST00000393546 NUP210LQ5VU65 1888 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 IGHV1-45A0A0A0MS14 117 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 GOLGA6L10A6NI86 522 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 MASP2O00187 686 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 MANBAO00462 879 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ULK1O75385 1050 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 CEACAM4O75871 244 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 SEMA3DO95025 777 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ETHE1O95571 254 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 COX6A1P12074 109 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ITGA3P26006 1051 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ALDH3A1P30838 453 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 BTG2P78543 158 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 SLAMF1Q13291 335 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 CASP8Q14790 479 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 IRAK1BP1Q5VVH5 260 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 TCTN3Q6NUS6 607 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 LANCL3Q6ZV70 420 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 PARP9Q8IXQ6 854 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF595Q8IYB9 648 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 FDCSPQ8NFU4 85 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 CNDP1Q96KN2 507 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 TUBB6Q9BUF5 446 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 GATA5Q9BWX5 397 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 SORBS1Q9BX66 1292 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 SEMA4CQ9C0C4 833 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 PRTFDC1Q9NRG1 225 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 RIC8BQ9NVN3 520 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 ARGLU1Q9NWB6 273 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 GPR83Q9NYM4 423 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 KCMF1Q9P0J7 381 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 FBXW2Q9UKT8 454 aa17.87■□□□□ 0.45
PDLIM7-204ENST00000393546 UBFD1O14562 309 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 CRCPO75575 148 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 ICAM2P13598 275 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 BSGP35613 385 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 HSD17B7P56937 341 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 OR4D2P58180 307 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF33BQ06732 778 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 PCOLCEQ15113 449 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 LACTB2Q53H82 288 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 CYP20A1Q6UW02 462 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 KBTBD2Q8IY47 623 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 ZCCHC7Q8N3Z6 543 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 FAM47BQ8NA70 645 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 TSLPQ969D9 159 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 MAPKAP1Q9BPZ7 522 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 TRMOQ9BU70 441 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 DDX31Q9H8H2 851 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 KCNK9Q9NPC2 374 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF71Q9NQZ8 489 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 MS4A12Q9NXJ0 267 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 SLC12A4Q9UP95 1085 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 TIMM22Q9Y584 194 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 PCDHGB7Q9Y5F8 929 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 ATRXP46100 2492 aa17.86■□□□□ 0.45
PDLIM7-204ENST00000393546 IGHV3-20A0A0C4DH32 117 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 BLACEA4D250 179 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 CYR61O00622 381 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 HSD3B1P14060 373 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 CPN2P22792 545 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 HSD3B2P26439 372 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 PGDP52209 483 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 AP2B1P63010 937 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 CSTF3Q12996 717 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 MYBPC3Q14896 1274 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 SFT2D3Q587I9 215 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 TCHHL1Q5QJ38 904 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 PAGE2Q7Z2X7 111 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 GPR180Q86V85 440 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 NUDT13Q86X67 352 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 GBP7Q8N8V2 638 aaPredicted RBP17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 THOC3Q96J01 351 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 MECRQ9BV79 373 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 LHPPQ9H008 270 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 MLXIPLQ9NP71 852 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 NECTIN3Q9NQS3 549 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 LYARQ9NX58 379 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 VPS29Q9UBQ0 182 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 PHF11Q9UIL8 331 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 TP53TG5Q9Y2B4 290 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 ZNF451Q9Y4E5 1061 aa17.85■□□□□ 0.45
PDLIM7-204ENST00000393546 TM9SF1O15321 606 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 NPHS1O60500 1241 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 CTNSO60931 367 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 EEDO75530 441 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 SEC24DO94855 1032 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 BPGMP07738 259 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 MAOAP21397 527 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 TLX1P31314 330 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 ETV4P43268 484 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 SLC13A2Q13183 592 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 RAPSNQ13702 412 aa17.84■□□□□ 0.45
PDLIM7-204ENST00000393546 ASB18Q6ZVZ8 466 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms