RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KNL1Q8NG31 2342 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 A0A1W2PQU0 124 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 PROS1P07225 676 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 NDUFV2P19404 249 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 HSPA7P48741 367 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 LSM3P62310 102 aaKnown RBP18.18■□□□□ 0.5
CCDC50-202ENST00000392456 CYP4F2P78329 520 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 CYP4F3Q08477 520 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TMEM198Q66K66 360 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 TYW3Q6IPR3 259 aaKnown RBP18.18■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF517Q6ZMY9 492 aaPredicted RBP18.18■□□□□ 0.5
CCDC50-202ENST00000392456 FAM131CQ96AQ9 280 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 CDK15Q96Q40 435 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 FZD3Q9NPG1 666 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 BRD7Q9NPI1 651 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 CCDC59Q9P031 241 aaKnown RBP18.18■□□□□ 0.5
CCDC50-202ENST00000392456 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 OAZ3Q9UMX2 235 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 GMPPBQ9Y5P6 360 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 HSPE1-MOB4S4R3N1 261 aa18.18■□□□□ 0.5
CCDC50-202ENST00000392456 MYO15AQ9UKN7 3530 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 STX16O14662 325 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CBSLP0DN79 551 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SRFP11831 508 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SELLP14151 372 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ALOX12P18054 663 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SHMT2P34897 504 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CBSP35520 551 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ABRQ12979 859 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 GRM7Q14831 915 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 UGT3A2Q3SY77 523 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF658BQ4V348 819 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 UNC5DQ6UXZ4 953 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CFAP77Q6ZQR2 320 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 KIF18BQ86Y91 864 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TRAPPC5Q8IUR0 188 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 DEFB123Q8N688 67 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 OR52B6Q8NGF0 335 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ENKURQ8TC29 256 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 MYOCQ99972 504 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 EML4Q9HC35 981 aaKnown RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CCM2LQ9NUG4 571 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 NUDT4Q9NZJ9 180 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 OSGIN1Q9UJX0 560 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3DA0A087WVF3 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3IA0A087WXS9 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3EA0A087X179 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3KA0A087X1G2 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3FA6NER0 549 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3LB9A6J9 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SSX5O60225 188 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SLCO2B1O94956 709 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 FTH1P02794 183 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3HP0C7X1 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 PPP2CBP62714 309 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 PPP2CAP67775 309 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CSTF3Q12996 717 aaKnown RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 PLEKHS1Q5SXH7 462 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3GQ6DHY5 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3CQ6IPX1 549 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 UBE2R2Q712K3 238 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 RASGRP3Q8IV61 690 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TBC1D3Q8IZP1 549 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ASZ1Q8WWH4 475 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 RHBDF1Q96CC6 855 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SLC47A1Q96FL8 570 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 COX14Q96I36 57 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 ZNF300Q96RE9 604 aaPredicted RBP18.17■□□□□ 0.5
CCDC50-202ENST00000392456 EGFL8Q99944 293 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CCM2Q9BSQ5 444 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TRMOQ9BU70 441 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 C1QTNF3Q9BXJ4 246 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 TM7SF3Q9NS93 570 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 OPTCQ9UBM4 332 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 CA14Q9ULX7 337 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 SCML1Q9UN30 329 aa18.17■□□□□ 0.5
CCDC50-202ENST00000392456 H0YAE9 185 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 AKR7A2O43488 359 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 ACSL1P33121 698 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 RPIAP49247 311 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SSTP61278 116 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 IRF4Q15306 451 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 PTP4A1Q93096 173 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 NCLNQ969V3 563 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 C3orf30Q96M34 536 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 MUS81Q96NY9 551 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SDHAF3Q9NRP4 125 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 DNAJC15Q9Y5T4 150 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 ATP6AP2A0A1C7CYW4 349 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 SLC5A10A0PJK1 596 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 LINC00587B1AMM8 73 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 ATP6AP2O75787 350 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 PGRP06401 933 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 PCMT1P22061 227 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 MAOBP27338 520 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 RPS9P46781 194 aaKnown RBP18.16■□□□□ 0.5
CCDC50-202ENST00000392456 CDK3Q00526 305 aa18.16■□□□□ 0.5
CCDC50-202ENST00000392456 LCP2Q13094 533 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms