RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CCDC126Q96EE4 140 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF354BQ96LW1 612 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 SERPINI1Q99574 410 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 CLMPQ9H6B4 373 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 KCNK13Q9HB14 408 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ZBTB20Q9HC78 741 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TMEM216Q9P0N5 145 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TBK1Q9UHD2 729 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 PHF11Q9UIL8 331 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 PCDHGA10Q9Y5H3 936 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TRAV17A0A0B4J275 112 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 CELA2AP08217 269 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 NUDT17P0C025 328 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 SBK3P0C264 359 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 KRT15P19012 456 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 MLLT10P55197 1068 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 VSNL1P62760 191 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 HERVK_113P63132 956 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 IFT88Q13099 833 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 ZRSR2Q15696 482 aaKnown RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 INAQ16352 499 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 PLEKHN1Q494U1 663 aaPredicted RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 COLEC12Q5KU26 742 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 FRG2Q64ET8 278 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 OR4C11Q6IEV9 310 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 RPUSD3Q6P087 351 aaKnown RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF793Q6ZN11 406 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 UBE3DQ7Z6J8 389 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 MILR1Q7Z6M3 343 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 SLC5A8Q8N695 610 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 GALNT11Q8NCW6 608 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 OR52B6Q8NGF0 335 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 HAS2Q92819 552 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 CNDP1Q96KN2 507 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 FRG2BQ96QU4 278 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 MTERF1Q99551 399 aaKnown RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 OR51B5Q9H339 312 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 ADAP2Q9NPF8 381 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 LYARQ9NX58 379 aaKnown RBP11.88□□□□□ -0.51
GGPS1-203ENST00000391855 TRPS1Q9UHF7 1281 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 RNF11Q9Y3C5 154 aa11.88□□□□□ -0.51
GGPS1-203ENST00000391855 FAM227AF5H4B4 570 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CYR61O00622 381 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CTNSO60931 367 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 VPS4BO75351 444 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 SHBGP04278 402 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 MAOAP21397 527 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 PPP2R1BP30154 601 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 HSD17B3P37058 310 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CCT5P48643 541 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 BTG2P78543 158 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 SLC13A2Q13183 592 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 MEP1AQ16819 746 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 TTC19Q6DKK2 380 aaPredicted RBP11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CUZD1Q86UP6 607 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 FAM47BQ8NA70 645 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 SUN3Q8TAQ9 357 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 ELP5Q8TE02 316 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 ELOVL6Q9H5J4 265 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 SEMA4BQ9NPR2 832 aaPredicted RBP11.87□□□□□ -0.51
GGPS1-203ENST00000391855 NECTIN3Q9NQS3 549 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 AGPAT4Q9NRZ5 378 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 AHSPQ9NZD4 102 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 KCMF1Q9P0J7 381 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 LUZP4Q9P127 313 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 MID2Q9UJV3 735 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 VPS4AQ9UN37 437 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 SNX6Q9UNH7 406 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 PPIEQ9UNP9 301 aaKnown RBP11.87□□□□□ -0.51
GGPS1-203ENST00000391855 BOD1L1Q8NFC6 3051 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 CPAMD8Q8IZJ3 1885 aa11.87□□□□□ -0.51
GGPS1-203ENST00000391855 OR5H15A6NDH6 313 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 H3BQF6 201 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 GOLGA8RI6L899 631 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 PLPP1O14494 284 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 DLX3O60479 287 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 SUPT7LO94864 414 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 MLYCDO95822 493 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CPN2P22792 545 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 TLX1P31314 330 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 BUD31P41223 144 aaPredicted RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 TNFSF10P50591 281 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CLCQ05315 142 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF33BQ06732 778 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 STX4Q12846 297 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 BIKQ13323 160 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ELAVL1Q15717 326 aaKnown RBP11.86□□□□□ -0.51
GGPS1-203ENST00000391855 CCDC153Q494R4 210 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ACER2Q5QJU3 275 aa11.86□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF678Q5SXM1 525 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms