RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 STK16O75716 305 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 MLYCDO95822 493 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 IFNA16P05015 189 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 GP5P40197 560 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 DLG1Q12959 904 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 SLMAPQ14BN4 828 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 PDK4Q16654 411 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 ZNF630Q2M218 657 aaPredicted RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 KBTBD12Q3ZCT8 623 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 MTFR2Q6P444 385 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 TRIM40Q6P9F5 258 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 ABHD17CQ6PCB6 329 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 ZNF793Q6ZN11 406 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 C3orf62Q6ZUJ4 267 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 GHDCQ8N2G8 530 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 TMEM156Q8N614 296 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 VMP1Q96GC9 406 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 CNOT10Q9H9A5 744 aaKnown RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 COPS7BQ9H9Q2 264 aaPredicted RBP13.19□□□□□ -0.3
SHOX-202ENST00000381575 GPRC5BQ9NZH0 403 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 KCMF1Q9P0J7 381 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 MEMO1Q9Y316 297 aa13.19□□□□□ -0.3
SHOX-202ENST00000381575 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 ENO4A6NNW6 628 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 SUPT3HB4E1H0 165 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 G3V3Y1 287 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 UBXN8O00124 270 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 SAP18O00422 153 aaKnown RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 CYR61O00622 381 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 PEX1O43933 1283 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 LDB3O75112 727 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 SUPT3HO75486 399 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 PCNAP12004 261 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 GGT5P36269 586 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 MSH2P43246 934 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 GPR143P51810 404 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 PLTPP55058 493 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 MTTPP55157 894 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 RAB10P61026 200 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 CHIT1Q13231 466 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 ADPRMQ3LIE5 342 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 UBE3DQ7Z6J8 389 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 DOLPP1Q86YN1 238 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 TCAIMQ8N3R3 496 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 PDPRQ8NCN5 879 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 MRRFQ96E11 262 aaKnown RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 PTCD3Q96EY7 689 aaKnown RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 SERINC2Q96SA4 455 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 MAPKAP1Q9BPZ7 522 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 NPLQ9BXD5 320 aaPredicted RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 PTBP2Q9UKA9 531 aaKnown RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
SHOX-202ENST00000381575 KLF13Q9Y2Y9 288 aaPredicted RBP13.18□□□□□ -0.3
SHOX-202ENST00000381575 HCFC1P51610 2035 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 A0A088AWK7 358 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 PINLYPA6NC86 204 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 TMEM200CA6NKL6 621 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 WWP2O00308 870 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 CLDN4O14493 209 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 EIF3HO15372 352 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHOX-202ENST00000381575 OR2J2O76002 312 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 PDE9AO76083 593 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 S100BP04271 92 aaPredicted RBP13.17□□□□□ -0.3
SHOX-202ENST00000381575 SLC35E2BP0CK96 405 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 COX6B1P14854 86 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 TFEBP19484 476 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ZNF10P21506 573 aaPredicted RBP13.17□□□□□ -0.3
SHOX-202ENST00000381575 SSR4P51571 173 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 SMSP52788 366 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 HSD17B7P56937 341 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ATP6V0D1P61421 351 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 IRF8Q02556 426 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 CBLBQ13191 982 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 TERF2Q15554 542 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 XKRXQ6PP77 449 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 RAPH1Q70E73 1250 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ZNF595Q8IYB9 648 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 ARMC10Q8N2F6 343 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 FBXO25Q8TCJ0 367 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 KIAA1191Q96A73 305 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
SHOX-202ENST00000381575 CCDC77Q9BR77 488 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms