RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SLC22A12Q96S37 553 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 GON7Q9BXV9 100 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 CD244Q9BZW8 370 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 BEX1Q9HBH7 125 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 ACSL6Q9UKU0 697 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
SDC1-202ENST00000381150 SPIN1Q9Y657 262 aaPredicted RBP13.28□□□□□ -0.28
SDC1-202ENST00000381150 GSAPA4D1B5 854 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 ADAMDEC1O15204 470 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 PDE9AO76083 593 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 PRAMEF1O95521 474 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 LAMP1P11279 417 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 ZNF250P15622 560 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 SDC2P34741 201 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 CSNK2BP67870 215 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 SPHARQ15513 63 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 LCN1P1Q5VSP4 162 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 B3GLCTQ6Y288 498 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 SZRD1Q7Z422 152 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 Q8N402 240 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 OTULINQ96BN8 352 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 SRRQ9GZT4 340 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 SLC9A8Q9Y2E8 581 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 CFAP20Q9Y6A4 193 aaKnown RBP13.27□□□□□ -0.28
SDC1-202ENST00000381150 V9GYH0 126 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 OBSL1O75147 1896 aa13.27□□□□□ -0.28
SDC1-202ENST00000381150 TRAV6A0A075B6T7 132 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 PCDH7O60245 1069 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 TOXO94900 526 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 CLCN4P51793 760 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 RAB8AP61006 207 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.29
SDC1-202ENST00000381150 LRRC32Q14392 662 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 FGFBP1Q14512 234 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 LINC00597Q9H2U6 94 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 CTPS2Q9NRF8 586 aa13.27□□□□□ -0.29
SDC1-202ENST00000381150 RFXAPO00287 272 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CASKO14936 926 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TRBC1P01850 177 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ETFAP13804 333 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 MLLT3P42568 568 aaPredicted RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 MAGEA2P43356 314 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 RPIAP49247 311 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CLCN7P51798 805 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ITGA1P56199 1179 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CLDN8P56748 225 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 HKDC1Q2TB90 917 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CRTC2Q53ET0 693 aaPredicted RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ZFAND1Q8TCF1 268 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TM9SF2Q99805 663 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 NDRG2Q9UN36 371 aaKnown RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 SLC22A14Q9Y267 594 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 HNRNPCL2B2RXH8 293 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 H3BUI4 141 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 NCR1O76036 304 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 EVI2BP34910 448 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 MAP2K3P46734 347 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 DDI2Q5TDH0 399 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ZNF783Q6ZMS7 281 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 SHFQ7M4L6 423 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 KRT74Q7RTS7 529 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ZNF367Q7RTV3 350 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CALHM3Q86XJ0 350 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ADGRG2Q8IZP9 1017 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 WFDC5Q8TCV5 224 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 RNF170Q96K19 258 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 P2RY12Q9H244 342 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 HCN4Q9Y3Q4 1203 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 MN1Q10571 1320 aaPredicted RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 B8ZZF3 427 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TEX46H3BTG2 121 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 SRCP12931 536 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 HLA-EP13747 358 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ZNF7P17097 686 aaPredicted RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 GKP32189 559 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 GZMKP49863 264 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 SMSP52788 366 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 PLD1Q13393 1074 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
SDC1-202ENST00000381150 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 PCBP2Q15366 365 aaKnown RBP eCLIP13.26□□□□□ -0.29
SDC1-202ENST00000381150 DUOXA1Q1HG43 343 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 ESCO2Q56NI9 601 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TPGS2Q68CL5 300 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TRIM69Q86WT6 500 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 TVP23BQ9NYZ1 205 aa13.26□□□□□ -0.29
SDC1-202ENST00000381150 DHRS7Q9Y394 339 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms