RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KRT4P19013 534 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 IL10P22301 178 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 JAK1P23458 1154 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CERS1P27544 350 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CRHR1P34998 444 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CD97P48960 835 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 PGDP52209 483 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 RAP1GDS1P52306 607 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 RPS13P62277 151 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 HERVK_113P63132 956 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CLCQ05315 142 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ZRSR2Q15696 482 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ADPRMQ3LIE5 342 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 UNC50Q53HI1 259 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ZNF678Q5SXM1 525 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 IRAK1BP1Q5VVH5 260 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 KHDRBS2Q5VWX1 349 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ABHD17CQ6PCB6 329 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ASB18Q6ZVZ8 466 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CHSY3Q70JA7 882 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 MILR1Q7Z6M3 343 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 PTRH1Q86Y79 214 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CA13Q8N1Q1 262 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 MREGQ8N565 214 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 L3MBTL4Q8NA19 623 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 FDCSPQ8NFU4 85 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 OR4F6Q8NGB9 312 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 HUS1BQ8NHY5 278 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 TRPC4APQ8TEL6 797 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 TBC1D20Q96BZ9 403 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 MTFMTQ96DP5 389 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CMTM7Q96FZ5 175 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 QRFPRQ96P65 431 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM237Q96Q45 408 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 OR1F2PQ96R84 312 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 SERINC2Q96SA4 455 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 MTERF1Q99551 399 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ERVK-6Q9BXR3 956 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ROPN1BQ9BZX4 212 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 VN1R1Q9GZP7 353 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 IQCGQ9H095 443 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 OR51B5Q9H339 312 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ROPN1Q9HAT0 212 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 CLK4Q9HAZ1 481 aaKnown RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ZBTB26Q9HCK0 441 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-202ENST00000380747 ADGRE2Q9UHX3 823 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 EMCNQ9ULC0 261 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 GRID1Q9ULK0 1009 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 PCSK5Q92824 1860 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 DOPEY1Q5JWR5 2465 aa8.7□□□□□ -1.02
HMGN1-202ENST00000380747 IGHV1-45A0A0A0MS14 117 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 IGHV3-20A0A0C4DH32 117 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 FAM227AF5H4B4 570 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 H0YIV9 168 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 RTCAO00442 366 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 PPP6CO00743 305 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CEACAM4O75871 244 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SEC24DO94855 1032 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 OTCP00480 354 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 HPP00738 406 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 PROCP04070 461 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 PDGFAP04085 211 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 COX6A1P12074 109 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 IMPDH1P20839 514 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SSR2P43308 183 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 EIF1AXP47813 144 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NEK2P51955 445 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 EFNA3P52797 238 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 PRKAA2P54646 552 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 MTTPP55157 894 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ACTN3Q08043 901 aaPredicted RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TRAF3Q13114 568 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 AIMP2Q13155 320 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 RUNX2Q13950 521 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ABRAXAS2Q15018 415 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NSDHLQ15738 373 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 IGFBP7Q16270 282 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CCDC153Q494R4 210 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM35AQ53FP2 167 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SGO1Q5FBB7 561 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TCTN3Q6NUS6 607 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TMEM205Q6UW68 189 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ZYG11AQ6WRX3 759 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 LANCL3Q6ZV70 420 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 NDUFAF7Q7L592 441 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CPEB2Q7Z5Q1 589 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 TRABD2AQ86V40 505 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SLC22A9Q8IVM8 553 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SRRM1Q8IYB3 904 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 GALNT16Q8N428 558 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CCNYL1Q8N7R7 359 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 FAM47BQ8NA70 645 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 SRFBP1Q8NEF9 429 aaKnown RBP8.69□□□□□ -1.02
HMGN1-202ENST00000380747 ZBTB9Q96C00 473 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 CCDC126Q96EE4 140 aa8.69□□□□□ -1.02
HMGN1-202ENST00000380747 THOC3Q96J01 351 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms