RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 PCDHA9Q9Y5H5 950 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 C9orf170A2RU37 121 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM200CA6NKL6 621 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 GTPBP1O00178 669 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 UBE2CO00762 179 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 CABYRO75952 493 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 CSF2RAP15509 400 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ENGP17813 658 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 EFNA1P20827 205 aaPredicted RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 IGFBP5P24593 272 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 RPS19P39019 145 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 PBX3P40426 434 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 C1QTNF8P60827 252 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 RAB2AP61019 212 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ECH1Q13011 328 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 FAM198BQ6UWH4 519 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 C7orf31Q8N865 590 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 ATP6V1C2Q8NEY4 427 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 OR10J5Q8NHC4 309 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 LPAR1Q92633 364 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 S100PBPQ96BU1 408 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 FBXO17Q96EF6 278 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 C11orf16Q9NQ32 467 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 DHCR7Q9UBM7 475 aaKnown RBP9□□□□□ -0.97
PTPRA-204ENST00000380393 USP18Q9UMW8 372 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 TRPV2Q9Y5S1 764 aa9□□□□□ -0.97
PTPRA-204ENST00000380393 GREB1LQ9C091 1923 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ISM1B1AKI9 464 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 GPR31O00270 319 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SDC3O75056 442 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HIST1H2AGP0C0S8 130 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 C6P13671 934 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HIST1H2ADP20671 130 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 GJA5P36382 358 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CCR9P51686 369 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CAMK2DQ13557 499 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MAD2L1BPQ15013 274 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 UGT8Q16880 541 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HIST2H2AA3Q6FI13 130 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 PDZD9Q8IXQ8 264 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 PLA2G15Q8NCC3 412 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 DMBX1Q8NFW5 382 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MISP3Q96FF7 219 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HIST1H2AHQ96KK5 128 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HIST1H2AJQ99878 128 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 GDE1Q9NZC3 331 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 COL2A1P02458 1487 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ACOD1A6NK06 481 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ANXA2P2A6NMY6 339 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 C1orf196B1AJZ1 125 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 K7ERI5 159 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ARVCFO00192 962 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 QSOX1O00391 747 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 DGAT1O75907 488 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SUPT7LO94864 414 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HMGCRP04035 888 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 GCGRP47871 477 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 OR4D2P58180 307 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 HSDL1Q3SXM5 330 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM107Q6UX40 140 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 USP30Q70CQ3 517 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SPAG16Q8N0X2 631 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 OR2L5Q8NG80 312 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 OR9A2Q8NGT5 310 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 UBE2FQ969M7 185 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 JAM3Q9BX67 310 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SLCO1C1Q9NYB5 712 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 POMT2Q9UKY4 750 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 NDRG4Q9ULP0 352 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 PRKAB1Q9Y478 270 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 UBA6A0AVT1 1052 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 C3orf70A6NLC5 250 aaPredicted RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 LCMT2O60294 686 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 SLC22A3O75751 556 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 APEX1P27695 318 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 LCN1P31025 176 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 UBE2IP63279 158 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CRHR2Q13324 411 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MTMR1Q13613 665 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 EIF4HQ15056 248 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 UGT3A2Q3SY77 523 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 USP39Q53GS9 565 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ESRP1Q6NXG1 681 aaKnown RBP8.99□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF227Q86WZ6 799 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 LDLRAD3Q86YD5 345 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 DCUN1D3Q8IWE4 304 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 Q8N402 240 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 MEIOBQ8N635 442 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 TFAP2BQ92481 460 aa8.99□□□□□ -0.97
PTPRA-204ENST00000380393 CREB3L1Q96BA8 519 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms