RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ATCAYQ86WG3 371 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SPATA6LQ8N4H0 392 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 DMBX1Q8NFW5 382 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 WNT8BQ93098 351 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 HGDQ93099 445 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PEX11GQ96HA9 241 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 HS6ST2Q96MM7 605 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC38A2Q96QD8 506 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 BARD1Q99728 777 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 MRPL45Q9BRJ2 306 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ASPNQ9BXN1 380 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 QRSL1Q9H0R6 528 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 AKTIPQ9H8T0 292 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PCDHB8Q9UN66 801 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ERVW-1Q9UQF0 538 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SAMHD1Q9Y3Z3 626 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 CDH10Q9Y6N8 788 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PRAMEF33A0A0G2JMD5 474 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FAM234BA2RU67 622 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PRAMEF10O60809 474 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 GADD45GO95257 159 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 APBB3O95704 486 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ADH1CP00326 375 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC35E2BP0CK96 405 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 EDN3P14138 238 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 POU3F2P20265 443 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PBX3P40426 434 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 RPS7P62081 194 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ELAVL2Q12926 359 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 CAMK2DQ13557 499 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PON3Q15166 354 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 LUZP2Q86TE4 346 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC22A9Q8IVM8 553 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC44A2Q8IWA5 706 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 KLHDC8BQ8IXV7 354 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ZFP82Q8N141 532 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 MIER2Q8N344 545 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 DPP10Q8N608 796 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 LPCAT1Q8NF37 534 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 NR4A3Q92570 626 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF419Q96HQ0 510 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 DIRAS2Q96HU8 199 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 NARS2Q96I59 477 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PFDN5Q99471 154 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 LMAN2LQ9H0V9 348 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 GAREM1Q9H706 876 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SEBOXQ9HB31 216 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FZD10Q9ULW2 581 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 NCKAP1Q9Y2A7 1128 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 TSC2P49815 1807 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 GLYATL1P3A0A0U1RQE8 302 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 H3BM21 787 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC31A2O15432 143 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FGF10O15520 208 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ATXN8OSP0DMR3 200 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 HOXB8P17481 243 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 TAS2R60P59551 318 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FAM189BP81408 668 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 DEFA6Q01524 100 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 LAPTM4AQ15012 233 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SSX2Q16385 188 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 DLK2Q6UY11 383 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ACOT1Q86TX2 421 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC9B2Q86UD5 537 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 HIPK1Q86Z02 1210 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC43A2Q8N370 569 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 EIF4E3Q8N5X7 224 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 L3MBTL4Q8NA19 623 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ATP6V1C2Q8NEY4 427 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 KHSRPQ92945 711 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 RHBDF1Q96CC6 855 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PABPC5Q96DU9 382 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SUSD3Q96L08 255 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 NEU1Q99519 415 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 VRK1Q99986 396 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 PDCD10Q9BUL8 212 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 ALX4Q9H161 411 aaPredicted RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 NXF3Q9H4D5 531 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SLC28A3Q9HAS3 691 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FOLH1BQ9HBA9 442 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 OLA1Q9NTK5 396 aaKnown RBP7.18□□□□□ -1.26
CDKL5-201ENST00000379989 FLRT1Q9NZU1 646 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 GHRLQ9UBU3 117 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 SSR3Q9UNL2 185 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 RNF215Q9Y6U7 377 aa7.18□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM88BA6NKF7 163 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SULT1C2O00338 296 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 BEST1O76090 585 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 KDM4BO94953 1096 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 MATN4O95460 622 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 C1RP00736 705 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 POLBP06746 335 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PRKAR1AP10644 381 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 CBR1P16152 277 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 SPI1P17947 270 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 RHCEP18577 417 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 LAP3P28838 519 aa7.17□□□□□ -1.26
CDKL5-201ENST00000379989 PTGFRP43088 359 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms