RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 NFAM1Q8NET5 270 aaPredicted RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 TTLQ8NG68 377 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 OR2W6PQ8NHA6 318 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 CAVIN3Q969G5 261 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PTCD3Q96EY7 689 aaKnown RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 SIGLEC12Q96PQ1 595 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 MRPL57Q9BQC6 102 aaKnown RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PARD6BQ9BYG5 372 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 MRPL46Q9H2W6 279 aaKnown RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 TRIM45Q9H8W5 580 aaPredicted RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PPCSQ9HAB8 311 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 PRDM9Q9NQV7 894 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 CENPEQ02224 2701 aa17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 DIDO1Q9BTC0 2240 aaKnown RBP17.72■□□□□ 0.43
TMEM88B-201ENST00000378821 A0A1W2PPM1 405 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 LRIT2A6NDA9 550 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 B4GALT2O60909 372 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 TBX6O95947 436 aaPredicted RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 PYGBP11216 843 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 COL8A1P27658 744 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 KCNK10P57789 538 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 STXBP1P61764 594 aaKnown RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 TBCCQ15814 346 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 ADPRMQ3LIE5 342 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 VN1R5Q7Z5H4 357 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 CA13Q8N1Q1 262 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 TMEM151AQ8N4L1 468 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 ACMSDQ8TDX5 336 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 GAL3ST3Q96A11 431 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 MS4A6EQ96DS6 147 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 PHF21BQ96EK2 531 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 PTCHD1Q96NR3 888 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 UTP23Q9BRU9 249 aaKnown RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 EFCAB11Q9BUY7 163 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 NPLQ9BXD5 320 aaPredicted RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 TMEM216Q9P0N5 145 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 ZNF490Q9ULM2 529 aaPredicted RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 TMCO1Q9UM00 188 aa17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 PPIEQ9UNP9 301 aaKnown RBP17.71■□□□□ 0.43
TMEM88B-201ENST00000378821 ASPDHA6ND91 283 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 SAGE2PA6NJ88 616 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 FAM227AF5H4B4 570 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 SMIM24O75264 130 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 CLEC3AO75596 197 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 NEURL1O76050 574 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 NUDT17P0C025 328 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 EPB42P16452 691 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 EEF1DP29692 281 aaKnown RBP17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 HNRNPH1P31943 449 aaKnown RBP17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 HNF4AP41235 474 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 CASP2P42575 452 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 TAS2R50P59544 299 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 PCDH1Q08174 1060 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 GTF2H2Q13888 395 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 RASA2Q15283 850 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 TOR1AIP1Q5JTV8 583 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 GTF2H2CQ6P1K8 395 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 GFRALQ6UXV0 394 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 GOLGA7Q7Z5G4 137 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 CNPY4Q8N129 248 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 QRFPRQ96P65 431 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 NECTIN3Q9NQS3 549 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 RAB21Q9UL25 225 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 MMACHCQ9Y4U1 282 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 ANGPTL3Q9Y5C1 460 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 CLDN16Q9Y5I7 305 aa17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 TNPO3Q9Y5L0 923 aaKnown RBP17.7■□□□□ 0.42
TMEM88B-201ENST00000378821 A8MT66 165 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 STX16-NPEPL1H3BU86 382 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 STX16O14662 325 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 CDH16O75309 829 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 LAPTM5Q13571 262 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 TERF2Q15554 542 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 OR1C1Q15619 314 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 PAGE2BQ5JRK9 111 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 ZNF787Q6DD87 383 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 SH2D5Q6ZV89 423 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 LCA5Q86VQ0 697 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 RPS19BP1Q86WX3 136 aaKnown RBP17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 SCUBE1Q8IWY4 988 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 SLC34A3Q8N130 599 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 THAP3Q8WTV1 239 aaPredicted RBP17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 CCT6BQ92526 530 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 RHBGQ9H310 441 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 SEC14L3Q9UDX4 400 aa17.69■□□□□ 0.42
TMEM88B-201ENST00000378821 GABRR3A8MPY1 467 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 ZG16O60844 167 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 WISP2O76076 250 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 UNC5CO95185 931 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 KRT15P19012 456 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 MAOAP21397 527 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 TRHRP34981 398 aaPredicted RBP17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 MLF1P58340 268 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 BTN3A2P78410 334 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 RUNX2Q13950 521 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 C1QL3Q5VWW1 255 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 SPINK14Q6IE38 97 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 GRHL2Q6ISB3 625 aa17.68■□□□□ 0.42
TMEM88B-201ENST00000378821 METTL2BQ6P1Q9 378 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms