RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 MED28Q9H204 178 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 ZC4H2Q9NQZ6 224 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 BTNL2Q9UIR0 455 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 GCM2O75603 506 aaPredicted RBP13.11□□□□□ -0.31
KIF3A-201ENST00000378735 LRATO95237 230 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 ICAM2P13598 275 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 BMP8BP34820 402 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 EVX1P49640 407 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 PGFP49763 221 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 CACNG1Q06432 222 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 RGNQ15493 299 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 PLK5Q496M5 336 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 NOXRED1Q6NXP6 359 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 OR52J3Q8NH60 311 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 PMEPA1Q969W9 287 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
KIF3A-201ENST00000378735 ELOVL6Q9H5J4 265 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 EVA1BQ9NVM1 165 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
KIF3A-201ENST00000378735 TLR4O00206 839 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 SRCP12931 536 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 IRS1P35568 1242 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 INPP1P49441 399 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 HSF2Q03933 536 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 C22orf42Q6IC83 251 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 OR7G3Q8NG95 312 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 HGDQ93099 445 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 PRR14Q9BWN1 585 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 SNX11Q9Y5W9 270 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 KCNE1BA0A087WTH5 132 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 CIB4A0PJX0 185 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 C1orf226A1L170 272 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 C7orf66A4D0T2 115 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 WWP2O00308 870 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 FZD6O60353 706 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 RPL9P32969 192 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 ACVRL1P37023 503 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 XCR1P46094 333 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 CLCNKAP51800 687 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 RAB14P61106 215 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 GFM1Q96RP9 751 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 B3GAT2Q9NPZ5 323 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 FLRT1Q9NZU1 646 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 ADAM30Q9UKF2 790 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 GSTK1Q9Y2Q3 226 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 TRPM7Q96QT4 1865 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 MBLAC1A4D2B0 266 aaPredicted RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 TSPAN4O14817 238 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 SLC30A4O14863 429 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 OR56A5P0C7T3 313 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 SLC6A1P30531 599 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 ATP12AP54707 1039 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 GRB14Q14449 540 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 OCLNQ16625 522 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 C3orf58Q8NDZ4 430 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 GEMIN6Q8WXD5 167 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 RBPMSQ93062 196 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 APIPQ96GX9 242 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
KIF3A-201ENST00000378735 DIMT1Q9UNQ2 313 aaKnown RBP13.1□□□□□ -0.31
KIF3A-201ENST00000378735 INSIG1O15503 277 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 CPSF4O95639 269 aaKnown RBP13.09□□□□□ -0.31
KIF3A-201ENST00000378735 ANXA3P12429 323 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 COX7A2P14406 83 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 GLULP15104 373 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 STOMP27105 288 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 B2MP61769 119 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 RBBP4Q09028 425 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 LRRC74AQ0VAA2 488 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 POU4F3Q15319 338 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 HSD17B12Q53GQ0 312 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
KIF3A-201ENST00000378735 QSOX2Q6ZRP7 698 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 TMEM40Q8WWA1 233 aa13.09□□□□□ -0.31
KIF3A-201ENST00000378735 UCKL1Q9NWZ5 548 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms