RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RAB39AQ14964 217 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 PGM2L1Q6PCE3 622 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 PDPRQ8NCN5 879 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 KLHL6Q8WZ60 621 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 OR5P2Q8WZ92 322 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 KLHDC7BQ96G42 594 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 FAM186AA6NE01 2351 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 CHST10O43529 356 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 NUAK1O60285 661 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 ABLIM3O94929 683 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 MMP2P08253 660 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 GNAO1P09471 354 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 UQCRC2P22695 453 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 RAB28P51157 221 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 TSTQ16762 297 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 OR56A1Q8NGH5 318 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 ASB11Q8WXH4 323 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 GPR174Q9BXC1 333 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 CPEB1Q9BZB8 566 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 ZDHHC7Q9NXF8 308 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 PCDHGA4Q9Y5G9 962 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 EIF3FO00303 357 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 DENRO43583 198 aaKnown RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 AOAHP28039 575 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 GRK6P43250 576 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 SIM1P81133 766 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 GK3PQ14409 553 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 EXOC3L2Q2M3D2 409 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 Q6ZSR9 355 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 RASGEF1AQ8N9B8 481 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ZNF480Q8WV37 535 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ISOC1Q96CN7 298 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 BIRC8Q96P09 236 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 MCHR1Q99705 422 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 GAL3ST1Q99999 423 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ELL3Q9HB65 397 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 PHF11Q9UIL8 331 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 IL1RNP18510 177 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CD72P21854 359 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 RAB14P61106 215 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 FADDQ13158 208 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 EIPR1Q53HC9 387 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 TMEM107Q6UX40 140 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 AMIGO1Q86WK6 493 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 OR4K14Q8NGD5 310 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 EZH1Q92800 747 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 FAM118AQ9NWS6 357 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 WBP11Q9Y2W2 641 aaKnown RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 LSM1O15116 133 aaKnown RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 SLC22A1O15245 554 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 B4GAT1O43505 415 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 C1SP09871 688 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 IGFALSP35858 605 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CLCN7P51798 805 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CLDN2P57739 230 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 C16orf78Q8WTQ4 265 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 NUDT8Q8WV74 236 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CIDECQ96AQ7 238 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 DTD2Q96FN9 168 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 NTMT1Q9BV86 223 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CWH43Q9H720 699 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ERVK-18Q9QC07 812 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 COL24A1Q17RW2 1714 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 H0YAE9 185 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 CFIP05156 583 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 IL12BP29460 328 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 IRS1P35568 1242 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 SLC36A3Q495N2 470 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-203ENST00000378169 LHX8Q68G74 356 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 SCAIQ8N9R8 606 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 SLC25A36Q96CQ1 311 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 GPR78Q96P69 363 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 TPSD1Q9BZJ3 242 aa12.64□□□□□ -0.39
NPHP4-203ENST00000378169 TAF4O00268 1085 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 C5AR1P21730 350 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 ARRB2P32121 409 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 DCTP40126 519 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 NPRL3Q12980 569 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 SELPLGQ14242 412 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 SBSNQ6UWP8 590 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms