RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 C18orf21Q32NC0 220 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 POM121L1PQ3SYA9 428 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GTDC1Q4AE62 458 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GARNL3Q5VVW2 1013 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GRHL2Q6ISB3 625 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 SERPINA13PQ6UXR4 307 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 POF1BQ8WVV4 589 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ASIC5Q9NY37 505 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF69Q9UC07 566 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ENPP4Q9Y6X5 453 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 TCRBV5S2A0A599 114 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 L7N2F9 121 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF623O75123 536 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GSRP00390 522 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 HNF1BP35680 557 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 SF3A2Q15428 464 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 SLC27A4Q6P1M0 643 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RNF44Q7L0R7 432 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 MRPL10Q7Z7H8 261 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ARL14EPQ8N8R7 260 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 DNASE1L2Q92874 299 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RIOK2Q9BVS4 552 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 SLC12A9Q9BXP2 914 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 TCF7L1Q9HCS4 588 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RHCGQ9UBD6 479 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 IL36AQ9UHA7 158 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF451Q9Y4E5 1061 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 E2F3O00716 465 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GUCA1AP43080 201 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 APLP1P51693 650 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CHIAQ9BZP6 476 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 OR51E2Q9H255 320 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RHBGQ9H310 441 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 IL37Q9NZH6 218 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ABCG2Q9UNQ0 655 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 KLK4Q9Y5K2 254 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 MEIOCA2RUB1 952 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 SEPT4O43236 478 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TRAPPC2P0DI81 140 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TRAPPC2BP0DI82 140 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 AMD1P17707 334 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 CSNK2A2P19784 350 aaPredicted RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PRDX3P30048 256 aaKnown RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 SCRN3Q0VDG4 424 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PRSS55Q6UWB4 352 aaPredicted RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 FRRS1Q6ZNA5 592 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 OR9A1PQ8NGU1 263 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 GGHQ92820 318 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 NUS1Q96E22 293 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 OR51I1Q9H343 314 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 CD93Q9NPY3 652 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 UCKL1Q9NWZ5 548 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 RDH8Q9NYR8 311 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TMEM5Q9Y2B1 443 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 KANTRA0A1W2PQU2 76 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 IL3P08700 152 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 IL1RNP18510 177 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 AKR1D1P51857 326 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 GGTA1PQ4G0N0 100 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 HLA-DQA1Q5Y7H0 255 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 RPL13AP3Q6NVV1 102 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 LYSMD2Q8IV50 215 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 NPLOC4Q8TAT6 608 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 WFIKKN2Q8TEU8 576 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF583Q96ND8 569 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 SNX18Q96RF0 628 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PHPT1Q9NRX4 125 aaPredicted RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 UGT2A1Q9Y4X1 527 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 SPO11Q9Y5K1 396 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 METTL15A6NJ78 407 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 ANXA2P2A6NMY6 339 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 LYRM1O43325 122 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 ANXA2P07355 339 aaKnown RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TACSTD2P09758 323 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PFKLP17858 780 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 XKR7Q5GH72 579 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 CLEC12AQ5QGZ9 265 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 C22orf39Q6P5X5 142 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TEX26Q8N6G2 289 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 B3GNT7Q8NFL0 401 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 HAVCR1Q96D42 359 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TM9SF2Q99805 663 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 HEBP2Q9Y5Z4 205 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 COLEC10Q9Y6Z7 277 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 PQBP1O60828 265 aaKnown RBP8.42□□□□□ -1.06
PCDH9-202ENST00000377865 RP2O75695 350 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 JUNDP17535 347 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 CD9P21926 228 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 MAGEA2P43356 314 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 AVPR1BP47901 424 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 CTSL3PQ5NE16 218 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 ARL9Q6T311 187 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 UNC5DQ6UXZ4 953 aa8.42□□□□□ -1.06
PCDH9-202ENST00000377865 TMCO2Q7Z6W1 182 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms