RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SLC35A3Q9Y2D2 325 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GM2AP17900 193 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 BRCC3P46736 316 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PRPF38BQ5VTL8 546 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 OR7G1Q8NGA0 311 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 OR10T2Q8NGX3 314 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PELI2Q9HAT8 420 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 EME2A4GXA9 379 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SMLR1H3BR10 107 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ARVCFO00192 962 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GSTO2Q9H4Y5 243 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SGK2Q9HBY8 427 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PPP4R1LQ9P1A2 415 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CPQQ9Y646 472 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SLC1A7O00341 560 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TSPAN3O60637 253 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SMCO1Q147U7 214 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CTU2Q2VPK5 515 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TAB3Q8N5C8 712 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CLMPQ9H6B4 373 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 A6NIZ1 184 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ACOD1A6NK06 481 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 B3GALT2O43825 422 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PRAMEF1O95521 474 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GCAP28676 217 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 RAP1BP61224 184 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 RAP1AP62834 184 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 USP51Q70EK9 711 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MTERF1Q99551 399 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 GPR21Q99679 349 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 NALCNQ8IZF0 1738 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DPEP1P16444 411 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 WDFY2Q96P53 400 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HBQ1P09105 142 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 S100A7P31151 101 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 KIAA0319Q5VV43 1072 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF691Q5VV52 312 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 PIDD1Q9HB75 910 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DEGS2Q6QHC5 323 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CBLL1Q75N03 491 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 HS3ST2Q9Y278 367 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 DAPL1A0PJW8 107 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CLUP10909 449 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 TPBGQ13641 420 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 AMHR2Q16671 573 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 SPRYD7Q5W111 196 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ANKRD46Q86W74 232 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 MKKSQ9NPJ1 570 aaPredicted RBP4.75□□□□□ -1.65
PCDH9-201ENST00000377861 ERVK-19Q9WJR5 959 aa4.75□□□□□ -1.65
PCDH9-201ENST00000377861 CXorf49A8MYA2 514 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CSF1P09603 554 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ELFN1P0C7U0 828 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CDRT4Q8N9R6 151 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZC3HAV1LQ96H79 300 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SLC28A3Q9HAS3 691 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MED31Q9Y3C7 131 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 POMT1Q9Y6A1 747 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 EN1Q05925 392 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CCDC85BQ15834 202 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PAQR3Q6TCH7 311 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GOT2P00505 430 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CDK1P06493 297 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CKMT2P17540 419 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ACTR1BP42025 376 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 E2F1Q01094 437 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OR10G2Q8NGC3 310 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 A4GALTQ9NPC4 353 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CAMTA1Q9Y6Y1 1673 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ECI2O75521 394 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF157P51786 506 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 PTPRRQ15256 657 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CD276Q5ZPR3 534 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF57Q68EA5 555 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 OR14K1Q8NGZ2 314 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 UBQLN2Q9UHD9 624 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 INTS6Q9UL03 887 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TDRKHQ9Y2W6 561 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 POP7O75817 140 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 EPHA4P54764 986 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CMTR2Q8IYT2 770 aaKnown RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 APOL5Q9BWW9 433 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 C1GALT1Q9NS00 363 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 KCNG2Q9UJ96 466 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GPR162Q16538 588 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 CPA6Q8N4T0 437 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 GALNT11Q8NCW6 608 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 NELL2Q99435 816 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 TCF25Q9BQ70 676 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 UQCC3Q6UW78 93 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 C11orf74Q86VG3 221 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 MUL1Q969V5 352 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 ZNF300Q96RE9 604 aaPredicted RBP4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SERINC2Q96SA4 455 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 AQP9O43315 295 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 SERPIND1P05546 499 aa4.74□□□□□ -1.65
PCDH9-201ENST00000377861 WASH2PQ6VEQ5 465 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms