RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 NECTIN3Q9NQS3 549 aa17.89■□□□□ 0.46
CBWD3-204ENST00000377349 E9PLN8 166 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 TAPBPO15533 448 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 STK16O75716 305 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 URI1O94763 535 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-204ENST00000377349 GSTA2P09210 222 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 ABOP16442 354 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 PTGER1P34995 402 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 PLA2G16P53816 162 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 PDK4Q16654 411 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 SULT1C3Q6IMI6 304 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 ZDHHC24Q6UX98 284 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 TBC1D1Q86TI0 1168 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-204ENST00000377349 CA13Q8N1Q1 262 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 FAM98AQ8NCA5 519 aaKnown RBP17.89■□□□□ 0.45
CBWD3-204ENST00000377349 APCDD1LQ8NCL9 501 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 ARMC2Q8NEN0 867 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 TTLQ8NG68 377 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 CREB3L4Q8TEY5 395 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 TREX2Q9BQ50 279 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-204ENST00000377349 VKORC1Q9BQB6 163 aa17.89■□□□□ 0.45
CBWD3-204ENST00000377349 COPS7BQ9H9Q2 264 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-204ENST00000377349 FREM3P0C091 2139 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 ITPR3Q14573 2671 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 NF1P21359 2839 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 TFEBP19484 476 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 SSTR2P30874 369 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 HNRNPH1P31943 449 aaKnown RBP17.88■□□□□ 0.45
CBWD3-204ENST00000377349 CYB561P49447 251 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 HLCSP50747 726 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 BMPR2Q13873 1038 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 TESK1Q15569 626 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 ADNP2Q6IQ32 1131 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 FAM47BQ8NA70 645 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 GAL3ST3Q96A11 431 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 SPOCK3Q9BQ16 436 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 CAPS2Q9BXY5 557 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 ENKD1Q9H0I2 346 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 CLDN16Q9Y5I7 305 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 HRH3Q9Y5N1 445 aa17.88■□□□□ 0.45
CBWD3-204ENST00000377349 MAP1AP78559 2803 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-204ENST00000377349 B3GALT2O43825 422 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 SH3BGRLO75368 114 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 WISP3O95389 354 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-204ENST00000377349 SLC13A2Q13183 592 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 TRIM40Q6P9F5 258 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 CLNKQ7Z7G1 428 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 KLHDC8AQ8IYD2 350 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 MARVELD2Q8N4S9 558 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 SREK1Q8WXA9 508 aaKnown RBP17.87■□□□□ 0.45
CBWD3-204ENST00000377349 C14orf79Q96F83 325 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 PRDM9Q9NQV7 894 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 PNO1Q9NRX1 252 aaKnown RBP17.87■□□□□ 0.45
CBWD3-204ENST00000377349 GPRC5BQ9NZH0 403 aa17.87■□□□□ 0.45
CBWD3-204ENST00000377349 ZNF223Q9UK11 482 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-204ENST00000377349 A0A088AWK7 358 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 UBXN8O00124 270 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 PCNAP12004 261 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 ZNF10P21506 573 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 RIPPLY3P57055 190 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 IRF8Q02556 426 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 GUCY2DQ02846 1103 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 DOC2AQ14183 400 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 ZKSCAN8Q15776 578 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 MROH9Q5TGP6 573 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 MYLK4Q86YV6 388 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 SULF2Q8IWU5 870 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 KIAA1191Q96A73 305 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 MS4A6EQ96DS6 147 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 PTCD3Q96EY7 689 aaKnown RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 LRRC1Q9BTT6 524 aa17.86■□□□□ 0.45
CBWD3-204ENST00000377349 REXO4Q9GZR2 422 aaKnown RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 CLK4Q9HAZ1 481 aaKnown RBP17.86■□□□□ 0.45
CBWD3-204ENST00000377349 ARHGAP21Q5T5U3 1957 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 LRIT2A6NDA9 550 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 TGFBR3LH3BV60 316 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 MYO1DO94832 1006 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 LTA4HP09960 611 aaKnown RBP17.85■□□□□ 0.45
CBWD3-204ENST00000377349 SLC35E2BP0CK96 405 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 CERS1P27544 350 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 RFC3P40938 356 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 MSH2P43246 934 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 MEOX1P50221 254 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 CBLBQ13191 982 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 CHIT1Q13231 466 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 HIST2H2ACQ16777 129 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-204ENST00000377349 CMPK2Q5EBM0 449 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 HIST2H2AA3Q6FI13 130 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 PDPRQ8NCN5 879 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 STAG3L4Q8TBR4 150 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 NUDT4Q9NZJ9 180 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 PPIEQ9UNP9 301 aaKnown RBP17.85■□□□□ 0.45
CBWD3-204ENST00000377349 NCKAP5O14513 1909 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 NINQ8N4C6 2090 aa17.85■□□□□ 0.45
CBWD3-204ENST00000377349 A0A1B0GTH9 108 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 MYOCOSA0A1B0GUC4 107 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PRRG2O14669 202 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 C1QAP02745 245 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 CRABP2P29373 138 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms