RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 OR2L8Q8NGY9 312 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TMCO6Q96DC7 493 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TRIB3Q96RU7 358 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 M0QZQ0 153 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 CHP2O43745 196 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 HTR1AP08908 422 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 LRRC25Q8N386 305 aaPredicted RBP13.1□□□□□ -0.31
GPC6-201ENST00000377047 BBS10Q8TAM1 723 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 STON2Q8WXE9 905 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 NR4A3Q92570 626 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 BIRC7Q96CA5 298 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 BPIP17213 487 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PPP1R3AQ16821 1122 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 HMGN2P46Q86SG4 172 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 OR4C15Q8NGM1 316 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 NXPE2Q96DL1 559 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 PEX11GQ96HA9 241 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 OR51I1Q9H343 314 aa13.1□□□□□ -0.31
GPC6-201ENST00000377047 FBRSL1Q9HCM7 1045 aaKnown RBP13.1□□□□□ -0.31
GPC6-201ENST00000377047 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
GPC6-201ENST00000377047 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.31
GPC6-201ENST00000377047 CTBP2P56545 445 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 NXPE4Q6UWF7 544 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 RHBDD1Q8TEB9 315 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 OSTF1Q92882 214 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 CASD1Q96PB1 797 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 TIGARQ9NQ88 270 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 PLEKHA6Q9Y2H5 1048 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 CIB4A0PJX0 185 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 C5orf51A6NDU8 294 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 CCNKO75909 580 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 RAB36O95755 333 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 S1PR4O95977 384 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 HNRNPA2B1P22626 353 aaKnown RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 CDKN2DP55273 166 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SGCAQ16586 387 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SLC36A4Q6YBV0 504 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 C9orf43Q8TAL5 461 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 CPNE2Q96FN4 548 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 OSBPL7Q9BZF2 842 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 GLS2Q9UI32 602 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 DNAJC25-GNG10A0A024R161 153 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 LOC100130705A0A1B0GUX0 176 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 C2orf92A0A1B0GVN3 265 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 C1orf226A1L170 272 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 FOXK1P85037 733 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 LRP8Q14114 963 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZNF613Q6PF04 617 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 GALNT10Q86SR1 603 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 NLGN4XQ8N0W4 816 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SLC7A8Q9UHI5 535 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 EMC8O43402 210 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SPARCP09486 303 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 SRCP12931 536 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 TM4SF4P48230 202 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 C10orf62Q5T681 223 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 OR4C11Q6IEV9 310 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 CHIAQ9BZP6 476 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 RPF2Q9H7B2 306 aaKnown RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 KCNK13Q9HB14 408 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 AREL1O15033 823 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZNF821O75541 412 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZNF84P51523 738 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 NIPAL4Q0D2K0 466 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ZNF782Q6ZMW2 699 aaPredicted RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 CPEB1Q9BZB8 566 aaKnown RBP13.09□□□□□ -0.31
GPC6-201ENST00000377047 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 ACTR3BQ9P1U1 418 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 C4BP0C0L5 1744 aa13.09□□□□□ -0.31
GPC6-201ENST00000377047 HTR3EA5X5Y0 456 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 GADD45AP24522 165 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 LAPTM4AQ15012 233 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 OCLNQ16625 522 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 EMC10Q5UCC4 262 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 PEX13Q92968 403 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 MEAF6Q9HAF1 191 aa13.08□□□□□ -0.31
GPC6-201ENST00000377047 DNMT3AQ9Y6K1 912 aaPredicted RBP13.08□□□□□ -0.31
GPC6-201ENST00000377047 KLHL33A6NCF5 533 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 DEFB110Q30KQ9 67 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 SCGB2B2Q4G0G5 96 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ZNF615Q8N8J6 731 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
GPC6-201ENST00000377047 MTG2Q9H4K7 406 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms