RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TMEM189-UBE2V1I3L0A0 370 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 SEC14L5O43304 696 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 C8GP07360 202 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 HLA-DMAP28067 261 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 HMGA2P52926 109 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 IRF5Q13568 498 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 GPR19Q15760 415 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 C22orf42Q6IC83 251 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 RFLNAQ6ZTI6 216 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 RTN4RL1Q86UN2 441 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 FAM109AQ8N4B1 249 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF557Q8N988 423 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 GDPD1Q8N9F7 314 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 HJURPQ8NCD3 748 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 GEMIN6Q8WXD5 167 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 BHMTQ93088 406 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 MSLNLQ96KJ4 702 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 FAM193BQ96PV7 902 aaPredicted RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 EXO1Q9UQ84 846 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF106Q9H2Y7 1883 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 DOC2AQ14183 400 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ADGRF1Q5T601 910 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ANXA8L1Q5VT79 327 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 TPGS1Q6ZTW0 290 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 C11orf74Q86VG3 221 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 NANOGP1Q8N7R0 232 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 SLC35A5Q9BS91 424 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 MND1Q9BWT6 205 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 STMN3Q9NZ72 180 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 RNF181Q9P0P0 153 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 NDRG2Q9UN36 371 aaKnown RBP15.79■□□□□ 0.12
TRIM39-201ENST00000376656 ALG5Q9Y673 324 aa15.79■□□□□ 0.12
TRIM39-201ENST00000376656 FADS2P1A8MWK0 482 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 POLR1CO15160 346 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ALAS2P22557 587 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 BCL2L1Q07817 233 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 BTBD16Q32M84 506 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ATP13A5Q4VNC0 1218 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MFSD14CQ5VZR4 134 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF770Q6IQ21 691 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 DPY19L3Q6ZPD9 716 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 LIX1LQ8IVB5 337 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 OR5AK3PQ8NH89 298 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MKRN2Q9H000 416 aaKnown RBP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TMEM245Q9H330 911 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 CWH43Q9H720 699 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ZDHHC3Q9NYG2 299 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MAPRE3Q9UPY8 281 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MAP4K5Q9Y4K4 846 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 DNMT3AQ9Y6K1 912 aaPredicted RBP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ENPP4Q9Y6X5 453 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TRAV19A0A0A6YYK7 116 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MGAT4DA6NG13 374 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 MEN1O00255 615 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 SYN3O14994 580 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 INPPL1O15357 1258 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 LRRTM2O43300 516 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 C6orf47O95873 294 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 RECKO95980 971 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 AP1S1P61966 158 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TMIGD1Q6UXZ0 262 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TAGAPQ8N103 731 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ATP6V1C2Q8NEY4 427 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 WFDC5Q8TCV5 224 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 UCK2Q9BZX2 261 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 YARS2Q9Y2Z4 477 aaKnown RBP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TRBV4-1A0A0J9YWV2 114 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TRBC2A0A5B9 178 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 OR6C75A6NL08 312 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TBL1XO60907 577 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 IFI30P13284 250 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 CPN2P22792 545 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 CDK6Q00534 326 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ZNF91Q05481 1191 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 LIPJQ5W064 366 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 PLET1Q6UQ28 207 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 PKP4Q99569 1192 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRIM39-201ENST00000376656 ENOPH1Q9UHY7 261 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 KLHL21Q9UJP4 597 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 TMPRSS11EQ9UL52 423 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 RAB23Q9ULC3 237 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 CLCA3PQ9Y6N3 262 aa15.78■□□□□ 0.12
TRIM39-201ENST00000376656 BRCA2P51587 3418 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 PLXNB3Q9ULL4 1909 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 GNG14A0A1W2PPG7 69 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 A0A1W2PQ72 361 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 NPIPB15A6NHN6 443 aaPredicted RBP15.77■□□□□ 0.12
TRIM39-201ENST00000376656 ARHGEF9O43307 516 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 PSKH1P11801 424 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 APEX1P27695 318 aaKnown RBP15.77■□□□□ 0.12
TRIM39-201ENST00000376656 CSKP41240 450 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 ASMTP46597 345 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 MAN2A2P49641 1150 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 BNC1Q01954 994 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 GPR17Q13304 367 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 NCF4Q15080 339 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 PLCZ1Q86YW0 608 aa15.77■□□□□ 0.12
TRIM39-201ENST00000376656 CCDC28AQ8IWP9 274 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms