RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 LAMP1P11279 417 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 PTNP21246 168 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF140P52738 457 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 TXNL4AP83876 142 aaKnown RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 IER5LQ5T953 404 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 CPXM2Q8N436 756 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 GOLM1Q8NBJ4 401 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 NR4A3Q92570 626 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 FBXL8Q96CD0 374 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 GTPBP2Q9BX10 602 aaKnown RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 SLX4Q8IY92 1834 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 C1orf226A1L170 272 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 RPS26P62854 115 aaKnown RBP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 DSC1Q08554 894 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 GFOD2Q3B7J2 385 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 C6orf141Q5SZD1 244 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 SLC35F1Q5T1Q4 408 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 NUP43Q8NFH3 380 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.08□□□□□ -0.32
C9orf47-203ENST00000375851 APIPQ96GX9 242 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
C9orf47-203ENST00000375851 E7EQ34 232 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 CDC123O75794 336 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 POU6F2P78424 691 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PON2Q15165 354 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 UNC5DQ6UXZ4 953 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 ACVR1CQ8NER5 493 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 TRMT2BQ96GJ1 504 aaKnown RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 MARK1Q9P0L2 795 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 LATO43561 262 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 HLA-DPB1P04440 258 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 KLK3P07288 261 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 CD47Q08722 323 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 TPRG1LQ5T0D9 272 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 LCN8Q6JVE9 175 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 XKR5Q6UX68 686 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 COMMD6Q7Z4G1 85 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 OR2AJ1Q8NGZ0 328 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 MED28Q9H204 178 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 GPRC5BQ9NZH0 403 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PIAS3Q9Y6X2 628 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 BLOC1S5-TXNDC5H3BN57 136 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PDCD5O14737 125 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 GPR39O43194 453 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 FHP07954 510 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PRDX3P30048 256 aaKnown RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 MS4A2Q01362 244 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 METTL27Q8N6F8 245 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 TOX2Q96NM4 488 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 BRD7Q9NPI1 651 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PAK6Q9NQU5 681 aaPredicted RBP13.07□□□□□ -0.32
C9orf47-203ENST00000375851 PRTFDC1Q9NRG1 225 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 LIPT1Q9Y234 373 aa13.07□□□□□ -0.32
C9orf47-203ENST00000375851 J3QRK9 145 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 EMC8O43402 210 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 RPS17P08708 135 aaKnown RBP13.06□□□□□ -0.32
C9orf47-203ENST00000375851 ETFAP13804 333 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
C9orf47-203ENST00000375851 FAM189BP81408 668 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 TUBA3CQ13748 450 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 DPY19L2P1Q6NXN4 242 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 OR7G3Q8NG95 312 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 TNFAIP8L1Q8WVP5 186 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 TSACCQ96A04 125 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-203ENST00000375851 TAMM41Q96BW9 452 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-203ENST00000375851 KCNK13Q9HB14 408 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 RNF6Q9Y252 685 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 IFT52Q9Y366 437 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 PPP6CO00743 305 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
C9orf47-203ENST00000375851 GTDC1Q4AE62 458 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 PAMR1Q6UXH9 720 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 CNIH3Q8TBE1 160 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 OSTF1Q92882 214 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 NKD1Q969G9 470 aa13.06□□□□□ -0.32
C9orf47-203ENST00000375851 ISG20Q96AZ6 181 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms