RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SLCO4A1Q96BD0 722 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TUBGCP3Q96CW5 907 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ALG14Q96F25 216 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 LINGO1Q96FE5 620 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ZNF597Q96LX8 424 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 C5orf34Q96MH7 638 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 KCNA7Q96RP8 456 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 TSC22D3Q99576 134 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 C17orf80Q9BSJ5 609 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 FEM1AQ9BSK4 669 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 SLC2A11Q9BYW1 496 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CIPCQ9C0C6 399 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 YIPF3Q9GZM5 350 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 WDR26Q9H7D7 661 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ZNF696Q9H7X3 374 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 COPS7BQ9H9Q2 264 aaPredicted RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 CERS4Q9HA82 394 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 MAGEE1Q9HCI5 957 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 FBRSL1Q9HCM7 1045 aaKnown RBP4.63□□□□□ -1.67
USP48-202ENST00000374730 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 C8orf4Q9NR00 106 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 HEBP1Q9NRV9 189 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GKN1Q9NS71 199 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 ARMC1Q9NVT9 282 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 GID8Q9NWU2 228 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 NDUFA13Q9P0J0 144 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 VPS51Q9UID3 782 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 IKZF3Q9UKT9 509 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 OGDHLQ9ULD0 1010 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 DHRS7Q9Y394 339 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 AP4S1Q9Y587 144 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 INSL5Q9Y5Q6 135 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 AP4B1Q9Y6B7 739 aa4.63□□□□□ -1.67
USP48-202ENST00000374730 CROCCQ5TZA2 2017 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 A0A1W2PP18 115 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 FAM234BA2RU67 622 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 E5RI56 91 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 H0Y626 953 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 PSMD9O00233 223 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 EIF3FO00303 357 aaPredicted RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 E2F3O00716 465 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TXNDC9O14530 226 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TSPAN3O60637 253 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 SNAP91O60641 907 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 SNX2O60749 519 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TBL1XO60907 577 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 CRCPO75575 148 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TNFAIP8O95379 198 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 AGR2O95994 175 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 GLUD1P00367 558 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 NPPAP01160 153 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TRBC1P01850 177 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 URODP06132 367 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 GPIP06744 558 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ZCCHC18P0CG32 403 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 MBL2P11226 248 aaPredicted RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 HGFP14210 728 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ZNF7P17097 686 aaPredicted RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 MSH3P20585 1137 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ATP6V1B2P21281 511 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 GKP32189 559 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 RFC2P35250 354 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 CSKP41240 450 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ZFP36L2P47974 494 aaKnown RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 SH3BGRP55822 239 aaPredicted RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 KCNK10P57789 538 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 ERVK-8P63133 956 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 SLC7A9P82251 487 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TXNL4AP83876 142 aaKnown RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 TWF1Q12792 350 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 RALGDSQ12967 914 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 APOFQ13790 326 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 RPS6KA2Q15349 733 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TGFBIQ15582 683 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 RBBP7Q16576 425 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 SMU1Q2TAY7 513 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 DEFB115Q30KQ5 88 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 GPR33Q49SQ1 333 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ZRANB3Q5FWF4 1079 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 MPP7Q5T2T1 576 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ARMC12Q5T9G4 340 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 LYPLAL1Q5VWZ2 237 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 METTL2BQ6P1Q9 378 aaKnown RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 SBSNQ6UWP8 590 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.62□□□□□ -1.673e-7■■□□□ 13.2
USP48-202ENST00000374730 SNX20Q7Z614 316 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 DNAJB7Q7Z6W7 309 aaPredicted RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 KRT77Q7Z794 578 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TMEM150AQ86TG1 271 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ITIH5Q86UX2 942 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 DHFR2Q86XF0 187 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 CHERPQ8IWX8 916 aaKnown RBP4.62□□□□□ -1.67
USP48-202ENST00000374730 DDIASQ8IXT1 998 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 RBFAQ8N0V3 343 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 CPXM2Q8N436 756 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 CARNMT1Q8N4J0 409 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 TMEM199Q8N511 208 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 DPP10Q8N608 796 aa4.62□□□□□ -1.67
USP48-202ENST00000374730 ANKFN1Q8N957 763 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms