RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 LAMP2P13473 410 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SLC5A12Q1EHB4 618 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 OLIG3Q7RTU3 272 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TMC8Q8IU68 726 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 CADM2Q8N3J6 435 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 OR5D16Q8NGK9 328 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 GPR151Q8TDV0 419 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 Q96MT0 163 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 CNPPD1Q9BV87 410 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SLC6A16Q9GZN6 736 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 ABCB9Q9NP78 766 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 DMRT3Q9NQL9 472 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SLC6A13Q9NSD5 602 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TRNAU1APQ9NX07 287 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 CDC123O75794 336 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SMIM18P0DKX4 95 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TCF3P15923 654 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 MPIP34949 423 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 GJA4P35212 333 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 STX4Q12846 297 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 GNA13Q14344 377 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 ZNF438Q7Z4V0 828 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 UBE2J2Q8N2K1 259 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 GOLM1Q8NBJ4 401 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 HDAC2Q92769 488 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 POP5Q969H6 163 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 UBE2FQ969M7 185 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 CPPED1Q9BRF8 314 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 P2RX2Q9UBL9 471 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 SCN4AP35499 1836 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 CPSF4LA6NMK7 179 aaKnown RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TBX1O43435 398 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
CLIC4-201ENST00000374379 ACPPP15309 386 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 XKP51811 444 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 MMP21Q8N119 569 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TBX5Q99593 518 aa12.97□□□□□ -0.33
CLIC4-201ENST00000374379 TFECO14948 347 aaPredicted RBP12.96□□□□□ -0.33
CLIC4-201ENST00000374379 MAGEB3O15480 346 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 BMP10O95393 424 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 RETP07949 1114 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 NR2F6P10588 404 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 MATN1P21941 496 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 PIGAP37287 484 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 P2RY2P41231 377 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 PGDP52209 483 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 MINDY4Q4G0A6 757 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 TMEM215Q68D42 235 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 TMEM107Q6UX40 140 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 MFSD2AQ8NA29 543 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 SLC17A9Q9BYT1 436 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 CLDN25C9JDP6 229 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 J3KTA2 159 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 FRS3O43559 492 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 ALPLP05186 524 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 CKMT1AP12532 417 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 HSD3B1P14060 373 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 HSD3B2P26439 372 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 CDK3Q00526 305 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 CAMK1Q14012 370 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 PRRT3Q5FWE3 981 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 NRSN1Q8IZ57 195 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 KBTBD8Q8NFY9 601 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 TMEM19Q96HH6 336 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 RSPH9Q9H1X1 276 aaPredicted RBP12.96□□□□□ -0.33
CLIC4-201ENST00000374379 ST14Q9Y5Y6 855 aa12.96□□□□□ -0.33
CLIC4-201ENST00000374379 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 KLK8O60259 260 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 STSP08842 583 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 CBLBQ13191 982 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 TMEM240Q5SV17 173 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 ZNF655Q8N720 491 aaPredicted RBP12.96□□□□□ -0.34
CLIC4-201ENST00000374379 TADA1Q96BN2 335 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 POLR2J2Q9GZM3 115 aaKnown RBP12.96□□□□□ -0.34
CLIC4-201ENST00000374379 BTBD1Q9H0C5 482 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 KRCC1Q9NPI7 259 aaPredicted RBP12.96□□□□□ -0.34
CLIC4-201ENST00000374379 IL20RAQ9UHF4 553 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.34
CLIC4-201ENST00000374379 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 SBF1O95248 1867 aa12.96□□□□□ -0.34
CLIC4-201ENST00000374379 ANHXE9PGG2 379 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 LCKP06239 509 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 RPL4P36578 427 aaKnown RBP12.95□□□□□ -0.34
CLIC4-201ENST00000374379 ZNF846Q147U1 533 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 MYBPC3Q14896 1274 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 ZNF77Q15935 545 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 ZNF311Q5JNZ3 666 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 COLEC12Q5KU26 742 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 KHDRBS2Q5VWX1 349 aaKnown RBP12.95□□□□□ -0.34
CLIC4-201ENST00000374379 KIAA1161Q6NSJ0 714 aa12.95□□□□□ -0.34
CLIC4-201ENST00000374379 CEP68Q76N32 757 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms