RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FAM83HQ6ZRV2 1179 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ANKRD46Q86W74 232 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PHACTR4Q8IZ21 702 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TBC1D3Q8IZP1 549 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 LILRA3Q8N6C8 439 aaPredicted RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 MFSD9Q8NBP5 474 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PLA2G15Q8NCC3 412 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 OR2L5Q8NG80 312 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 OR14C36Q8NHC7 312 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 NT5CQ8TCD5 201 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 GANCQ8TET4 914 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TRUB1Q8WWH5 349 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TM4SF18Q96CE8 201 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 HSH2DQ96JZ2 352 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 HRASLS5Q96KN8 279 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 MUS81Q96NY9 551 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PITX2Q99697 317 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 MAPKAP1Q9BPZ7 522 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 POLR2J2Q9GZM3 115 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC6A16Q9GZN6 736 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 POLR2J3Q9H1A7 115 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 NKX2-4Q9H2Z4 354 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PIF1Q9H611 641 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 IGFLR1Q9H665 355 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CXorf21Q9HAI6 301 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 C3orf14Q9HBI5 128 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ANKHQ9HCJ1 492 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 BCL2L10Q9HD36 194 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 KRT84Q9NSB2 600 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 POT1Q9NUX5 634 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 KIF17Q9P2E2 1029 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 HCN2Q9UL51 889 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 NDRG4Q9ULP0 352 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TDRKHQ9Y2W6 561 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 TMEM98Q9Y2Y6 226 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 SAMHD1Q9Y3Z3 626 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 CEPT1Q9Y6K0 416 aa8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 ZFC3H1O60293 1989 aaKnown RBP8.31□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A0A6YYD5 115 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KIR2DS5A0A0G2JLQ3 304 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A0G2JNG1 304 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A0G2JPF8 293 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 A0A1W2PPV9 198 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 CCDC160A6NGH7 325 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 HNRNPCL2B2RXH8 293 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 HNRNPCL3B7ZW38 293 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 PRAMEF26H0Y7S4 382 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KIR2DS3K7RE56 304 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 BCKDKO14874 412 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ZSCAN9O15535 394 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 LATO43561 262 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 OR1F1O43749 312 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 IFNW1P05000 195 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 IL3P08700 152 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 HNRNPCL4P0DMR1 293 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 EEF1B2P24534 225 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 TLX1P31314 330 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KRT20P35900 424 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 MVDP53602 400 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 YBX1P67809 324 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 OLR1P78380 273 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KCNJ10P78508 379 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 EEF1A2Q05639 463 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KCNAB2Q13303 367 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 SPIDRQ14159 915 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 KIR2DS5Q14953 304 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 SUZ12Q15022 739 aaKnown RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 RPE65Q16518 533 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 MICAQ29983 383 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 FOXB2Q5VYV0 432 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ZCCHC12Q6PEW1 402 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 CHST15Q7LFX5 561 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 AMIGO1Q86WK6 493 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 NAGSQ8N159 534 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 IL17RCQ8NAC3 791 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 GPR156Q8NFN8 814 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 GIPC3Q8TF64 312 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 OIT3Q8WWZ8 545 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 MYLIPQ8WY64 445 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 FGF14Q92915 247 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 Q96MT0 163 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF300Q96RE9 604 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 GDF15Q99988 308 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 NPLQ9BXD5 320 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 PLA2G2FQ9BZM2 168 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ABCG4Q9H172 646 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 OR51B5Q9H339 312 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 ANKRD19PQ9H560 264 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 DUSP21Q9H596 190 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 GPN2Q9H9Y4 310 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 PALMDQ9NP74 551 aa8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 POLMQ9NP87 494 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 NPDC1Q9NQX5 325 aaPredicted RBP8.3□□□□□ -1.08
SNRNP40-202ENST00000373720 SLC6A13Q9NSD5 602 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms