RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 LRRC70Q7Z2Q7 622 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 ISCA2Q86U28 154 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 PDSS2Q86YH6 399 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 KRT78Q8N1N4 520 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 ANKRD53Q8N9V6 530 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 TTLQ8NG68 377 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 SLC44A1Q8WWI5 657 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 POM121Q96HA1 1249 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 PAFAH2Q99487 392 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 RHOXF2Q9BQY4 288 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 LRFN1Q9P244 771 aa17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 PTBP2Q9UKA9 531 aaKnown RBP17.97■□□□□ 0.47
TRAPPC3-204ENST00000373166 A0A096LPK6 155 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 CCDC189A1A4V9 331 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 HMX2A2RU54 273 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 OR2W5A6NFC9 320 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ZNF860A6NHJ4 632 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 CDK2AP1O14519 115 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ADAM10O14672 748 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ZNHIT1O43257 154 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 MAN1A2O60476 641 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 CCNT2O60583 730 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ZNF888P0CJ79 500 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 GSTM2P28161 218 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 IRF9Q00978 393 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 DEFB134Q4QY38 66 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 FBXO48Q5FWF7 155 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 PAPD4Q6PIY7 484 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 CHERPQ8IWX8 916 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 CENPLQ8N0S6 344 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 LGI4Q8N135 537 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ESAMQ96AP7 390 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 NXNL1Q96CM4 212 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ATOH8Q96SQ7 321 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 LPAR4Q99677 370 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 PITHD1Q9GZP4 211 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 EHD1Q9H4M9 534 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 ASB1Q9Y576 335 aa17.96■□□□□ 0.47
TRAPPC3-204ENST00000373166 UBXN8O00124 270 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 GALR3O60755 368 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 ALDOAP04075 364 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 IL10P22301 178 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 MSH2P43246 934 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 NSDHLQ15738 373 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 SFT2D3Q587I9 215 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 XKR6Q5GH73 641 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 TOR1AIP1Q5JTV8 583 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 TMIGD1Q6UXZ0 262 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 RHEBL1Q8TAI7 183 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 UHMK1Q8TAS1 419 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 UBTD2Q8WUN7 234 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 PTCD3Q96EY7 689 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 CD244Q9BZW8 370 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 SLC6A16Q9GZN6 736 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 VPS11Q9H270 941 aa17.95■□□□□ 0.46
TRAPPC3-204ENST00000373166 FOXO6A8MYZ6 492 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 POC1B-GALNT4F8VUJ3 575 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 SLC25A12O75746 678 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 KLHL2O95198 593 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 SERPINA6P08185 405 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 CNTFP26441 200 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 HNF4AP41235 474 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 KCNC1P48547 511 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 ART1P52961 327 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 STXBP1P61764 594 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 ABRAXAS2Q15018 415 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 ACAP2Q15057 778 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 PAGE2BQ5JRK9 111 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 TRMT10CQ7L0Y3 403 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 RPS19BP1Q86WX3 136 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 SHISA5Q8N114 240 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 UTP15Q8TED0 518 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 CCT6BQ92526 530 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 SEC16BQ96JE7 1060 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 OR1F2PQ96R84 312 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 EFCAB11Q9BUY7 163 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 CDCP1Q9H5V8 836 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 NT5DC2Q9H857 520 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 OPTCQ9UBM4 332 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 ZNF180Q9UJW8 692 aa17.94■□□□□ 0.46
TRAPPC3-204ENST00000373166 EXOC1LA0A1B0GW35 172 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 NME2P1O60361 137 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 NADKO95544 446 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 ABHD2P08910 425 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 GFAPP14136 432 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 NME2P22392 152 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 HPDP32754 393 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 PTGS2P35354 604 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 RAB8AP61006 207 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 IRF8Q02556 426 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 LAPTM5Q13571 262 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 HIST2H2ACQ16777 129 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 RNFT1Q5M7Z0 435 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 HIST2H2AA3Q6FI13 130 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 FGD2Q7Z6J4 655 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 CPSF7Q8N684 471 aaKnown RBP17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 PLPP5Q8NEB5 264 aa17.93■□□□□ 0.46
TRAPPC3-204ENST00000373166 OR5T3Q8NGG3 340 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms