RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KDM1BQ8NB78 822 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 CGREF1Q99674 301 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
RAPGEF1-201ENST00000372189 A0A1W2PQU0 124 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM189A1O60320 539 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 GMDSO60547 372 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF217O75362 1048 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 GLI3P10071 1580 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLCN7P51798 805 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PIM3Q86V86 326 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CENPSQ8N2Z9 138 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CHST4Q8NCG5 386 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZDHHC12Q96GR4 267 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZFP3Q96NJ6 502 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 TSNAXQ99598 290 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 POLR2J3Q9H1A7 115 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ABCB7O75027 752 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 IL7RP16871 459 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 NTHL1P78549 312 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 SCARB2Q14108 478 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 NXPE1Q8N323 547 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CLDN19Q8N6F1 224 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 FATE1Q969F0 183 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PCDHGA12O60330 932 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 SHMT2P34897 504 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 GRK5P34947 590 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PAMR1Q6UXH9 720 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 NATD1Q8N6N6 113 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCNC2Q96PR1 638 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ADAP2Q9NPF8 381 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 C19orf25Q9UFG5 118 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRORSD1PA6NEY8 169 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 DUXAA6NLW8 204 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ANXA2P07355 339 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 MAKP20794 623 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 GLDCP23378 1020 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 TGM4P49221 684 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 XKP51811 444 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 OLIG2Q13516 323 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 KIF18BQ86Y91 864 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CILP2Q8IUL8 1156 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 GALNT12Q8IXK2 581 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC5A11Q8WWX8 675 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 KCNN3Q9UGI6 736 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 AHSGP02765 367 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ALPPP05187 535 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 C5AR1P21730 350 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 S100PP25815 95 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 CST6Q15828 149 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PLEKHS1Q5SXH7 462 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 FRG2Q64ET8 278 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR2T5Q6IEZ7 315 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC25A25Q6KCM7 469 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 ASCC1Q8N9N2 400 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 PAPD5Q8NDF8 572 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR2T29Q8NH02 315 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 FRG2BQ96QU4 278 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 TCF7L1Q9HCS4 588 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 IFT46Q9NQC8 304 aa12.84□□□□□ -0.35
RAPGEF1-201ENST00000372189 OR2AT4A6NND4 320 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 TLR4O00206 839 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 TXNL1O43396 289 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 PRPS1L1P21108 318 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 MAGEB1P43366 347 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 BIDP55957 195 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 VLDLRP98155 873 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF234Q14588 700 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 DCST2Q5T1A1 773 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 SLC30A6Q6NXT4 461 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 ZNF527Q8NB42 609 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 NEK7Q8TDX7 302 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 CRYGNQ8WXF5 182 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 SMPDL3BQ92485 455 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 FOXJ1Q92949 421 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 DERL2Q9GZP9 239 aa12.83□□□□□ -0.35
RAPGEF1-201ENST00000372189 MYH3P11055 1940 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 CDC7O00311 574 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ITGB1P05556 798 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 KLK1P06870 262 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 GSK3BP49841 420 aa12.83□□□□□ -0.36
RAPGEF1-201ENST00000372189 ERVK-25P63136 954 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms