RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 LMAN1LQ9HAT1 526 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ANKHQ9HCJ1 492 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FGF22Q9HCT0 170 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CD320Q9NPF0 282 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ANK1P16157 1881 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC5A10A0PJK1 596 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SNTNA6NMZ2 147 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GFYI3L273 518 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FXYD1O00168 92 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ARNTLO00327 626 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GAPDHSO14556 408 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RGS10O43665 173 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FPR1P21462 350 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TCEA1P23193 301 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SMIM11AP58511 58 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 DCDC1P59894 354 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MLLT1Q03111 559 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 NCF4Q15080 339 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 UGT8Q16880 541 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 NEK10Q6ZWH5 1172 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TRIM46Q7Z4K8 759 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 AQP11Q8NBQ7 271 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CAMKVQ8NCB2 501 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 OR5D16Q8NGK9 328 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 NECTIN4Q96NY8 510 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FAM83CQ9BQN1 747 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 NEUROD4Q9HD90 331 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 P2RX2Q9UBL9 471 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CLDN4O14493 209 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PSIP1O75475 530 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PRKRAO75569 313 aaKnown RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CFIP05156 583 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 C8BP07358 591 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 CERS1P27544 350 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TTKP33981 857 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 OPRD1P41143 372 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GSTM5P46439 218 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TOP3AQ13472 1001 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 RGNQ15493 299 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC5A12Q1EHB4 618 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 KCTD21Q4G0X4 260 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 FAAH2Q6GMR7 532 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 KIAA1161Q6NSJ0 714 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GHDCQ8N2G8 530 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 PACRGLQ8N7B6 248 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 SLC38A4Q969I6 547 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 TP53INP1Q96A56 240 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 LMAN2LQ9H0V9 348 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 IKZF5Q9H5V7 419 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
TGFBR3-202ENST00000370399 GTPBP1O00178 669 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 NR2F6P10588 404 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 BMP2P12643 396 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 RPL4P36578 427 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 MNX1P50219 401 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 RPA4Q13156 261 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ITGADQ13349 1161 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 LARS2Q15031 903 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF311Q5JNZ3 666 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 PERM1Q5SV97 790 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 OR4C11Q6IEV9 310 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 MMP21Q8N119 569 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 CLIP4Q8N3C7 705 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 L3MBTL4Q8NA19 623 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 CCL4L1Q8NHW4 92 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 TEX47Q8TBZ9 253 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 PATE1Q8WXA2 126 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 STON2Q8WXE9 905 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 GATA6Q92908 595 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 TMIGD2Q96BF3 282 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ZHX1-C8orf76Q96EF9 292 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 PDXPQ96GD0 296 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 COPS4Q9BT78 406 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 MVB12BQ9H7P6 319 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 C8orf4Q9NR00 106 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ARMC1Q9NVT9 282 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 UBAP1Q9NZ09 502 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 TEKT2Q9UIF3 430 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ERGIC3Q9Y282 383 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 PRSS38A1L453 326 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 AREL1O15033 823 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 GREM1O60565 184 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 UGDHO60701 494 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ETHE1O95571 254 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 DRD1P21728 446 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 HHEXQ03014 270 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 NPTX1Q15818 432 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ZNF630Q2M218 657 aaPredicted RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 CRB2Q5IJ48 1285 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 CEP68Q76N32 757 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 ASPGQ86U10 573 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 TRIM69Q86WT6 500 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 CYP4Z2PQ8N1L4 340 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 MARVELD2Q8N4S9 558 aa6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 WDR36Q8NI36 951 aaKnown RBP6.8□□□□□ -1.32
TGFBR3-202ENST00000370399 GEMIN6Q8WXD5 167 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms