RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 RBM12BQ8IXT5 1001 aaKnown RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 NETO1Q8TDF5 533 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 DUSP26Q9BV47 211 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 DUSP23Q9BVJ7 150 aa16.49■□□□□ 0.23
UBE3D-203ENST00000369747 DCAF13Q9NV06 445 aaKnown RBP16.49■□□□□ 0.23
UBE3D-203ENST00000369747 GNG14A0A1W2PPG7 69 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 CASC3O15234 703 aaKnown RBP16.48■□□□□ 0.23
UBE3D-203ENST00000369747 COMMD6Q7Z4G1 85 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 FAM129CQ86XR2 697 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.48■□□□□ 0.23
UBE3D-203ENST00000369747 RSC1A1Q92681 617 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 NCLNQ969V3 563 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 TRAPPC9Q96Q05 1148 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 SLC38A3Q99624 504 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 FAM192AQ9GZU8 254 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 EXO1Q9UQ84 846 aaKnown RBP16.48■□□□□ 0.23
UBE3D-203ENST00000369747 RP1P56715 2156 aa16.48■□□□□ 0.23
UBE3D-203ENST00000369747 LY6G6EA0A0G2JKS1 128 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 EME2A4GXA9 379 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 EVPLLA8MZ36 301 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 CLIC1O00299 241 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 DEAF1O75398 565 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PRKD3O94806 890 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 CPSF4O95639 269 aaKnown RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 TGFB1P01137 390 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ALPPL2P10696 532 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF23P17027 643 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 EFNA1P20827 205 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 NBL1P41271 181 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PPP1CAP62136 330 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 LIN52Q52LA3 116 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 CPTPQ5TA50 214 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 TBPL2Q6SJ96 375 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF621Q6ZSS3 439 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 VN1R5Q7Z5H4 357 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 SERPINA11Q86U17 422 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 AVL9Q8NBF6 648 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 SLC47A1Q96FL8 570 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PRPF18Q99633 342 aaKnown RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 HAUS8Q9BT25 410 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ADI1Q9BV57 179 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 OR51B5Q9H339 312 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 CUEDC1Q9NWM3 386 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 HRASLS2Q9NWW9 162 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 UTS2RQ9UKP6 389 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 MAPRE3Q9UPY8 281 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 TSC22D4Q9Y3Q8 395 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 U3KQA8 63 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 GSAPA4D1B5 854 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 RHPN2P1A8MT19 583 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ISM1B1AKI9 464 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 SAP18O00422 153 aaKnown RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 CDX4O14627 284 aaPredicted RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 NUDT21O43809 227 aaKnown RBP16.47■□□□□ 0.23
UBE3D-203ENST00000369747 UBXN7O94888 489 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 KLHL18O94889 574 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PGM3O95394 542 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 GLB1P16278 677 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 GPX2P18283 190 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ALDH4A1P30038 563 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 HPCAL1P37235 193 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PIK3CBP42338 1070 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 MERTKQ12866 999 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 WDR48Q8TAF3 677 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 FLVCR1-AS1Q8TAF5 88 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 TMBIM1Q969X1 311 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 TWSG1Q9GZX9 223 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 SEMA4GQ9NTN9 838 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 OLAHQ9NV23 265 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 BTNL2Q9UIR0 455 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PADI4Q9UM07 663 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 PCDHB11Q9Y5F2 797 aa16.47■□□□□ 0.23
UBE3D-203ENST00000369747 ASCC3Q8N3C0 2202 aaKnown RBP16.46■□□□□ 0.23
UBE3D-203ENST00000369747 IGKV1-8A0A0C4DH67 115 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 SERPINA1P01009 418 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 GBAP04062 536 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 GNAO1P09471 354 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 PAX7P23759 505 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 PRDX1Q06830 199 aaKnown RBP16.46■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF763Q0D2J5 394 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 SLC36A3Q495N2 470 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 ZNF385BQ569K4 471 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 TMEM214Q6NUQ4 689 aaKnown RBP16.46■□□□□ 0.23
UBE3D-203ENST00000369747 TMIGD1Q6UXZ0 262 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 UBE2E3Q969T4 207 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 PHF12Q96QT6 1004 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 YIPF3Q9GZM5 350 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 PCBD2Q9H0N5 130 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 UCK1Q9HA47 277 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 PARD6AQ9NPB6 346 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 DNAAF2Q9NVR5 837 aaKnown RBP16.46■□□□□ 0.23
UBE3D-203ENST00000369747 ATP6V1HQ9UI12 483 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 KLHL20Q9Y2M5 609 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 WDFY3Q8IZQ1 3526 aa16.46■□□□□ 0.23
UBE3D-203ENST00000369747 RIF1Q5UIP0 2472 aaKnown RBP16.46■□□□□ 0.22
UBE3D-203ENST00000369747 OR5K3A6NET4 321 aa16.45■□□□□ 0.22
UBE3D-203ENST00000369747 IL1RNP18510 177 aa16.45■□□□□ 0.22
UBE3D-203ENST00000369747 OR1D5P58170 312 aa16.45■□□□□ 0.22
UBE3D-203ENST00000369747 APOFQ13790 326 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms