RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 ACAT2Q9BWD1 397 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 RAB11FIP5Q9BXF6 653 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 GABARAPL3Q9BY60 117 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 EPS8L2Q9H6S3 715 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 TAAR2Q9P1P5 351 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 MUTYHQ9UIF7 546 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 CDH23Q9H251 3354 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 ZNF99A8MXY4 864 aaPredicted RBP12.55□□□□□ -0.4
ECM1-202ENST00000369047 TNFRSF11BO00300 401 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 AQP1P29972 269 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 BSGP35613 385 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 CLCNKAP51800 687 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 NFATC3Q12968 1075 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 LAPTM4AQ15012 233 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 ITPRIPL2Q3MIP1 535 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 RNF130Q86XS8 419 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 HDDC3Q8N4P3 179 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 ANKRD53Q8N9V6 530 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 TTLQ8NG68 377 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 NFKBIDQ8NI38 313 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 CNIH3Q8TBE1 160 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 GEMIN6Q8WXD5 167 aaKnown RBP12.55□□□□□ -0.4
ECM1-202ENST00000369047 TM4SF18Q96CE8 201 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 ZNF300Q96RE9 604 aaPredicted RBP12.55□□□□□ -0.4
ECM1-202ENST00000369047 NEUROD4Q9HD90 331 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 LYVE1Q9Y5Y7 322 aa12.55□□□□□ -0.4
ECM1-202ENST00000369047 COL4A3Q01955 1670 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 TRPM6Q9BX84 2022 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 TNFRSF4P43489 277 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 HMGA2P52926 109 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 RPS21P63220 83 aaKnown RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 RPP38P78345 283 aaKnown RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 SLC35A2P78381 396 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 MVKQ03426 396 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 SIGLEC14Q08ET2 396 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 FGD3Q5JSP0 725 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 B3GNT8Q7Z7M8 397 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 NUDT13Q86X67 352 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 ANKRD13BQ86YJ7 626 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 SVOPQ8N4V2 548 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 C2orf73Q8N5S3 287 aaPredicted RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 EDAQ92838 391 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 TAMM41Q96BW9 452 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 NEURL3Q96EH8 262 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 ZNF717Q9BY31 904 aaPredicted RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 NAA50Q9GZZ1 169 aaKnown RBP12.54□□□□□ -0.4
ECM1-202ENST00000369047 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
ECM1-202ENST00000369047 A0A1B0GVG6 124 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 A0A1W2PPV9 198 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 A0A1W2PPW3 197 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 NDUFS2O75306 463 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 CLEC3AO75596 197 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 DSTNP60981 165 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 EMX1Q04741 257 aaPredicted RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 SGCGQ13326 291 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 NPTX1Q15818 432 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 MICAQ29983 383 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 PRSS53Q2L4Q9 553 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 ZNF776Q68DI1 518 aaPredicted RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 KIAA1161Q6NSJ0 714 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 TSEN54Q7Z6J9 526 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 RORBQ92753 470 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 FKBP10Q96AY3 582 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 F2RL3Q96RI0 385 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 FERD3LQ96RJ6 166 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 PSD2Q9BQI7 771 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 C1QTNF2Q9BXJ5 285 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 CCDC90BQ9GZT6 254 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 MBNL1Q9NR56 388 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 TM7SF3Q9NS93 570 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 ENOPH1Q9UHY7 261 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 MRPS17Q9Y2R5 130 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 ZNF451Q9Y4E5 1061 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 H7BY64 318 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 PDPK1O15530 556 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 XPNPEP2O43895 674 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 BCL10O95999 233 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 CYP4B1P13584 511 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 SOAT1P35610 550 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 ARFIP1P53367 373 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 EMP3P54852 163 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 MANFP55145 182 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 PRDX1Q06830 199 aaKnown RBP12.53□□□□□ -0.4
ECM1-202ENST00000369047 MLC1Q15049 377 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 IRF4Q15306 451 aa12.53□□□□□ -0.4
ECM1-202ENST00000369047 MLF2Q15773 248 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms