RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 HNMTP50135 292 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CASP9P55211 416 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SLBPQ14493 270 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM3-212ENST00000368533 MEP1AQ16819 746 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 ZNF658BQ4V348 819 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 FRG2Q64ET8 278 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 GTF2IRD2BQ6EKJ0 949 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 TTC23LQ6PF05 361 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 GALNT5Q7Z7M9 940 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 GTF2IRD2Q86UP8 949 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 ARMC8Q8IUR7 673 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 ELMOD2Q8IZ81 293 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CADM2Q8N3J6 435 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 PAPD5Q8NDF8 572 aaKnown RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 FRG2BQ96QU4 278 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 NTMT1Q9BV86 223 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 TEX101Q9BY14 249 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 C1orf109Q9NX04 203 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CAB39Q9Y376 341 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 ORC6Q9Y5N6 252 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SCN3AQ9NY46 2000 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 H7BY64 318 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CDK2AP1O14519 115 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SSX4O60224 188 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SEC14L2O76054 403 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SERPINA1P01009 418 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 ALOX5P09917 674 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 C7P10643 843 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 BCKDHAP12694 445 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 NPPBP16860 134 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 ACADLP28330 430 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 GTF2E2P29084 291 aaKnown RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 DGKEP52429 567 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 RPS13P62277 151 aaKnown RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 SP140Q13342 867 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 MLF2Q15773 248 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 BROXQ5VW32 411 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SLC16A12Q6ZSM3 486 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 R3HCC1LQ7Z5L2 792 aaKnown RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 GRAMD2AQ8IUY3 354 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CCDC103Q8IW40 242 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CELF2-AS1Q8N7Q2 184 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 SPERTQ8NA61 448 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 UBTD2Q8WUN7 234 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 BMFQ96LC9 184 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 PRAP1Q96NZ9 151 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 C8orf33Q9H7E9 229 aaPredicted RBP10.19□□□□□ -0.78
TPM3-212ENST00000368533 RMND5AQ9H871 391 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 MMP17Q9ULZ9 603 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 CCL27Q9Y4X3 112 aa10.19□□□□□ -0.78
TPM3-212ENST00000368533 FAM170BA6NMN3 283 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 ANKRD28O15084 1053 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SEMA4FO95754 770 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 IL6P05231 212 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 DCNP07585 359 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 CYP4B1P13584 511 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TRIM23P36406 574 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ACTR1BP42025 376 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 HLCSP50747 726 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PNLIPRP1P54315 467 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ACTR1AP61163 376 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ADARB1P78563 741 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 FOXD4Q12950 439 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 NKG7Q16617 165 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TJAP1Q5JTD0 557 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 DESI1Q6ICB0 168 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PDZD3Q86UT5 571 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 RIMKLAQ8IXN7 391 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 MFSD4AQ8N468 514 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 OR8J3Q8NGG0 315 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 HUS1BQ8NHY5 278 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ATL1Q8WXF7 558 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 GUCD1Q96NT3 240 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TMEM9Q9P0T7 183 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 DNAJB9Q9UBS3 223 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TBC1D29Q9UFV1 150 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 KCNE2Q9Y6J6 123 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PMF1-BGLAPU3KQ54 211 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SCN2AQ99250 2005 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 HEATR5BQ9P2D3 2071 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 ALPLP05186 524 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 PPM1FP49593 454 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 MRPS21P82921 87 aaKnown RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 DGCR6Q14129 220 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 EOGTQ5NDL2 527 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TTC23Q5W5X9 447 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 CAPN13Q6MZZ7 669 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 PAGE2Q7Z2X7 111 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 MICU2Q8IYU8 434 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 EID3Q8N140 333 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 FAM83FQ8NEG4 500 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 OR13H1Q8NG92 308 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 INPP5KQ9BT40 448 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 CCDC177Q9NQR7 707 aaPredicted RBP10.18□□□□□ -0.78
TPM3-212ENST00000368533 SLC6A13Q9NSD5 602 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 SLC25A37Q9NYZ2 338 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 AASSQ9UDR5 926 aa10.18□□□□□ -0.78
TPM3-212ENST00000368533 TRPS1Q9UHF7 1281 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms