RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CAV1Q03135 178 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 STX4Q12846 297 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 RUNX2Q13950 521 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 TBCCQ15814 346 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 C18orf21Q32NC0 220 aaPredicted RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 AGAP11Q8TF27 550 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 MTFMTQ96DP5 389 aaKnown RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 WDR34Q96EX3 536 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 AICDAQ9GZX7 198 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 DPH5Q9H2P9 285 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 CAB39LQ9H9S4 337 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 LYRM4Q9HD34 91 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 SMYD2Q9NRG4 433 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 HPF1Q9NWY4 346 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 COQ3Q9NZJ6 369 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 ERVK-11Q9UQG0 969 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 UTP11Q9Y3A2 253 aaKnown RBP13.83□□□□□ -0.2
CTSD-202ENST00000367196 CACNA1CQ13936 2221 aa13.83□□□□□ -0.2
CTSD-202ENST00000367196 LRBAP50851 2863 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 FAM159BA6NKW6 160 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 ACOT7O00154 380 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 TAPBPO15533 448 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 PHGDHO43175 533 aaKnown RBP13.82□□□□□ -0.2
CTSD-202ENST00000367196 PEX1O43933 1283 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 CCNT2O60583 730 aaKnown RBP13.82□□□□□ -0.2
CTSD-202ENST00000367196 CTNSO60931 367 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 IFNA16P05015 189 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 ELAVL4P26378 380 aaKnown RBP13.82□□□□□ -0.2
CTSD-202ENST00000367196 CERS1P27544 350 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 STX2P32856 288 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 NAB1Q13506 487 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 BMPR2Q13873 1038 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 SERTAD2Q14140 314 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 ZKSCAN8Q15776 578 aaPredicted RBP13.82□□□□□ -0.2
CTSD-202ENST00000367196 TMEM35AQ53FP2 167 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 GRTP1Q5TC63 336 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 ABHD17CQ6PCB6 329 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 PAOXQ6QHF9 649 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 TBC1D1Q86TI0 1168 aaPredicted RBP13.82□□□□□ -0.2
CTSD-202ENST00000367196 ZNF227Q86WZ6 799 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 SULF2Q8IWU5 870 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 CTAGE3PQ8IX95 158 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 OR14A16Q8NHC5 309 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 C16orf52Q8NHV5 167 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 STAG3L4Q8TBR4 150 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 ASB15Q8WXK1 588 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 QRFPRQ96P65 431 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 CENPKQ9BS16 269 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 RAB17Q9H0T7 212 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 NMRAL1Q9HBL8 299 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 NUDT4Q9NZJ9 180 aa13.82□□□□□ -0.2
CTSD-202ENST00000367196 DYRK3O43781 588 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 COX7A2P14406 83 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 CRABP2P29373 138 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 PTGS2P35354 604 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 HSF1Q00613 529 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 DOC2AQ14183 400 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 OR4D1Q15615 310 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 HSDL2Q6YN16 418 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 CHSY3Q70JA7 882 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 SPATA6LQ8N4H0 392 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 ZFP62Q8NB50 900 aaPredicted RBP13.81□□□□□ -0.2
CTSD-202ENST00000367196 MORN4Q8NDC4 146 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 PSD4Q8NDX1 1056 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 SPATA4Q8NEY3 305 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 CA5BP1Q8WTZ4 195 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 UBXN10Q96LJ8 280 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 COPS7AQ9UBW8 275 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 VTI1BQ9UEU0 232 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 ADGRE2Q9UHX3 823 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
CTSD-202ENST00000367196 PPT2Q9UMR5 302 aa13.81□□□□□ -0.2
CTSD-202ENST00000367196 SYCE1LA8MT33 242 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CXorf49A8MYA2 514 aaPredicted RBP13.8□□□□□ -0.2
CTSD-202ENST00000367196 CYR61O00622 381 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTSD-202ENST00000367196 PIAS1O75925 651 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 WISP2O76076 250 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 SSTR2P30874 369 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 PTGER1P34995 402 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 MSH2P43246 934 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 GPR143P51810 404 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 HNRNPFP52597 415 aaKnown RBP13.8□□□□□ -0.2
CTSD-202ENST00000367196 PHEXP78562 749 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CHIT1Q13231 466 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 SLMAPQ14BN4 828 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 RNFT1Q5M7Z0 435 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 TMEM211Q6ICI0 200 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 MED27Q6P2C8 311 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 RGS9BPQ6ZS82 235 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 VN1R5Q7Z5H4 357 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 CLNKQ7Z7G1 428 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 DOLPP1Q86YN1 238 aa13.8□□□□□ -0.2
CTSD-202ENST00000367196 OR5L2Q8NGL0 311 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms