RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 KRT86O43790 486 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SPOPO43791 374 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CST8O60676 142 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 KCNJ13O60928 360 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SORBS2O94875 1100 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 TMEM63AO94886 807 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZBTB11O95625 1053 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 AGTP01019 485 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SLC35G4P0C7Q5 338 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 PVRP15151 417 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 HLA-DPA1P20036 260 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CYP2A7P20853 494 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CDH3P22223 829 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 HNRNPH3P31942 346 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CDKN2BP42772 138 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 LMAN1P49257 510 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 DIO1P49895 249 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 TXNL4AP83876 142 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 OLIG2Q13516 323 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ITGA9Q13797 1035 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 DAG1Q14118 895 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 KRT33BQ14525 404 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 LARS2Q15031 903 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SLC1A5Q15758 541 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 KYNUQ16719 465 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ASTE1Q2TB18 679 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 PLEKHS1Q5SXH7 462 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 IZUMO3Q5VZ72 239 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZDHHC20Q5W0Z9 365 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 JMJD6Q6NYC1 403 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 TMEM65Q6PI78 240 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 FAM198BQ6UWH4 519 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF517Q6ZMY9 492 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 RNF44Q7L0R7 432 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 PID1Q7Z2X4 250 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 VSIG1Q86XK7 387 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SYTL1Q8IYJ3 562 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CFAP206Q8IYR0 622 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 DSELQ8IZU8 1212 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF567Q8N184 647 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 RBMXL3Q8N7X1 1067 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR4E2Q8NGC2 313 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR4K2Q8NGD2 314 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF398Q8TD17 642 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 DENND1AQ8TEH3 1009 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CPT1BQ92523 772 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF501Q96CX3 271 aaPredicted RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF778Q96MU6 729 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 HIST1H2AAQ96QV6 131 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 CHP1Q99653 195 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 APOL2Q9BQE5 337 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 FICDQ9BVA6 458 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 NUDT9Q9BW91 350 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 XPO4Q9C0E2 1151 aaKnown RBP4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 SLC7A5P2Q9GIP4 190 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 PRSS22Q9GZN4 317 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 GOLPH3Q9H4A6 298 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 TRABDQ9H4I3 376 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 KIR3DX1Q9H7L2 352 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 C10orf88Q9H8K7 445 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 MLXIPLQ9NP71 852 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ASIC5Q9NY37 505 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 HACD3Q9P035 362 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 RSPH14Q9UHP6 348 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 LCMT1Q9UIC8 334 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 BTRCQ9Y297 605 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 ARL5AQ9Y689 179 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 FER1L5A0AVI2 2057 aa4.98□□□□□ -1.61
RNU4-4P-201ENST00000364588 LRRK2Q5S007 2527 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 USP9YO00507 2555 aaPredicted RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 MDC1Q14676 2089 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 BTN3A3O00478 584 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CCL22O00626 93 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 DPM1O60762 260 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CEACAM4O75871 244 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SRP72O76094 671 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 EPOP01588 193 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CAPN1P07384 714 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 RAB40ALP0C0E4 278 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 APEHP13798 732 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ST6GAL1P15907 406 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 BTF3P20290 206 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ADRA1DP25100 572 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OTX2P32243 289 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 PTGER1P34995 402 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 RORAP35398 523 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ARHGAP25P42331 645 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 NR2C2P49116 596 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 GSDMDP57764 484 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 FOXL2P58012 376 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 PRKAA1Q13131 559 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ATP1A4Q13733 1029 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 TFDP2Q14188 446 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 DEFB110Q30KQ9 67 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNF789Q5FWF6 425 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 LRRC38Q5VT99 294 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 PAPD7Q5XG87 772 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 DCDC5Q6ZRR9 648 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 BZW1Q7L1Q6 419 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms